| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0211 |
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| Symbol | atoS |
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| ID | 4185316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 257412 |
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| End bp | 258932 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638070221 |
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| Product | sensor histidine kinase |
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| Protein accession | YP_676843 |
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| Protein GI | 110636636 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0352661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.776224 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGACG AATTAGAAAA ATATAAAAGA GAAAATGCGG ATTTAAAAAA GGAGATTGAA
CGGTTAAAAA ATTCATCTGC ATCAAATACG TATAAAGTAA TTTTTGAGGC ATCTCCGGAC
ATTCTTATTC AGCTGAATGC AGACTATAAA ATCATTGTTA TTCATATTCC CAATATTGAA
GAGGAAAGAG TCAATACAGT TGTCGGCAAG GATATTTTTG ATGTAACGCC TGAATATACT
CACGTGAAAA TGAAAAATGC GTTAACGTCT GTTTTTCGCG ACGGAGAAGT TGTTAAATAT
TTTTCTGAAG GAGAAACAAT GGGTTCGTAC AGGTATTACG ACAACTATTT ATCTCCGATA
AAAGATGCGG AGGGAAACAT CACGACGGTT TATTTTAGGA GCAGGGATAT AACAGCCCAA
AAAATTGCCG AAAAAGTTTT ACTGGATAAT GAACGGAAAT TAAAAACTGT TTACGAAAAT
TCCATTCAAT TTCTGACGGT ATTGGATCTT GACCGTAAGT TCATCTGGTT TAATAAAAAT
GCCAGAGACA GAAGTCCTGC GGTTTTTGGT AAGGATCTTA TTGTCGGAGA AGTGGCAGAA
AGCTATATCG CAAAAGAATA CAGGACAGGC TTTGTTGAAA ATTTTAATAA AGCAGTAGCC
GGTGAAACGA TTACCTATAC CAGAAAATAT GCCTTGAATA ATGCTCCGTT CTTTTTAGAG
TTGTCGCTTG CACCGGTTTA TAATAACGAC AATACCGTTG TAGGGGTAGC ATTGACAGGA
ATCAATGTAA CGAAACACAA AGAGTATGAG GATTATTTAA AACGCATTAA TCTGGAGCTG
GTGCAGCAGA ATGAAAAGTT AAATCAGTAT TCCTACATTA TATCACACAA TCTTAGAGGG
CCTATAGCGA CTCTGATGGG GCTTGTGCAG GTATTTGAAC AGTGCAGGCA TGAATCGGAC
CAGCTTGATG AGATTATGCG GCATGTATAC AAGTCTGCCG TGAATCTGGA TTCGATTATA
AAGGATCTGA ATACGGTTGT TACGAATTCC GGACAGGAAG GAAATCTTAA AACTACCATC
GATTTAAAAG AAGAGTGCGA TGGAATCATT TTTCTGTTAG CGTCGCAGAT AGAAAAAGCC
AGCGCTGAAT TTATTATTGA CTTTGACCAA TACCCGATAC TTTTTTCTAT TAAAAGCTAT
ATTCATAGCA TATTGTATAA TTTAATTTAT AATGCTATAA AATACAGAAG GACACATGTT
ACACCTGTGA TCCGCATTCA GAGTTATATT GAAAATGATG GCATGCTATG CATTGAATGT
ACTGATAATG GCCTTGGCAT AGATCTGGAC AAATTCGGCA GCCGCCTGTT TGGATTTTAT
AAACGTTTTC ACACACACGT TGAAGGAAAA GGCTTGGGTC TGCATCTGGT AAAAAAACAA
GTTGAATTGC TCGGCGGCCG AATTGAAGTA CAAAGTGTTG TTGATGAAGG TTCGACGTTT
AGAATATTTT TACCTAAATA A
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| Protein sequence | MEDELEKYKR ENADLKKEIE RLKNSSASNT YKVIFEASPD ILIQLNADYK IIVIHIPNIE
EERVNTVVGK DIFDVTPEYT HVKMKNALTS VFRDGEVVKY FSEGETMGSY RYYDNYLSPI
KDAEGNITTV YFRSRDITAQ KIAEKVLLDN ERKLKTVYEN SIQFLTVLDL DRKFIWFNKN
ARDRSPAVFG KDLIVGEVAE SYIAKEYRTG FVENFNKAVA GETITYTRKY ALNNAPFFLE
LSLAPVYNND NTVVGVALTG INVTKHKEYE DYLKRINLEL VQQNEKLNQY SYIISHNLRG
PIATLMGLVQ VFEQCRHESD QLDEIMRHVY KSAVNLDSII KDLNTVVTNS GQEGNLKTTI
DLKEECDGII FLLASQIEKA SAEFIIDFDQ YPILFSIKSY IHSILYNLIY NAIKYRRTHV
TPVIRIQSYI ENDGMLCIEC TDNGLGIDLD KFGSRLFGFY KRFHTHVEGK GLGLHLVKKQ
VELLGGRIEV QSVVDEGSTF RIFLPK
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