Gene CHU_0208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0208 
Symbol 
ID4185313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp253588 
End bp256008 
Gene Length2421 bp 
Protein Length806 aa 
Translation table11 
GC content35% 
IMG OID638070217 
Producthypothetical protein 
Protein accessionYP_676840 
Protein GI110636633 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0830445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.52685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTTTATA TTTATAAAGA TGATATTATT TATTTAGCAA CTATGCAAAT AAATAAGCGG 
CTGAATACAA AAGTTGATGT ATCAAAAAAA ATAGATATCA GCATCTTAGA GAAATTTCCG
GAATTATCCA TTGGCTTTCA TGATGTAAAA TGTTATGAAC CGGGAGCAGG AAAGCCTGTA
ATTTTTGCTT CAGTCAAAAA TCTATTCATA ACCTTTGATA TCAAAGATGT CTGGAATGGC
AACTACATTA TTGATAAAGT TTTTCTGGAA GATGGTCACA TTCATTTAAG AACGGATGAA
AATGGTGTAC ACAACTTCAT GATCCTTAAA AAAGATACAA GTACTGCAAA AAGCAATTCT
GATTTTTCCA TTTCATTCAT ACAATTAAAG AACATTGATT TTATTTACGA CTTCAGACCA
AGCAATCACT TATACCAATC GGATATTAAA ATAACAGAGG CTTCTTTGGT ACATGCCAGG
AATGACTTTA CCATTCATGT CACAGGCGAT ATGCATACGG ATGGTATACG CATAAATGAA
AATAACTTCC TGCAGAACAA AGACATTAAA CTATCCTCCA AGATACGCTA CAATACCGAA
TCTGAAGTAT TCAGCATTAC TCCATCAACC CTGCACATTA ATACAGGTGC CTATGCTGTT
GAGGGTTTAT ATGATATAAA AAAATCGTTT GTGGATCTCC GCTTTAAAAC GGACAAAAAC
GATATTCAAA GTTTTGTTTC CATTCTGCCT AAAGCGTATG CAGCAAGCAT TCAGGAATAT
AAAAGTACAG GCAATGTATA CTTTAACGGA ACCATTAAAG GTACCGCAAG TAATGCGCAC
AGCCCTTCTA TTAATATCAA CTTTGGATTT GACCACGCTA CGTTCTATCA CCCGGGTACC
AAACAGCAAA TTACAGATGC GTTCCTTACC GGTACATATA CCAATGGCGA CCAGCATACG
CTGGCATCGT CTTCTGTAAA ACTTTCAGAC CTGAAAATAA CCATAGACAA TAAACCTGTC
TCAGGCTATT TTTACATGAA CAATTTTGAA GATCCGCATA TTGATACGCA CCTAAAAGGC
AGTGTCATTC TAAGCAAAAT TCTTGCCTTC GTACCTAAAC ACCCGTTTGA AAAAGCTTCC
GGAGAAATTG ATTTTGATAT TGAATTTAAA GGCCGCACAT CTGATCTGAA AACAAAAGCG
GGTTATGCAA ACATTGAAAC CTCGGGCGAC CTGGCATTAA AAAATATTGA AGCAAAAATA
ACTTCGTATC CACACACCAT TCGCATTGCC GAAGCTGTTT GCCTGTTTAC CAAAAATGAT
ATTTCCATAG ATAATATGGA GCTGTCCGTA GGCAAAAACG ATGTGGTGTT AAATGGTATT
TTCAGAAATT TAATTGGTAA AATATTTTTT CCGAACCAGT TTGTGTATGT ACAGGCAGAT
ATGACAATGG GCAATATTTT TCTGGAAGAT ATTTTAATGT CTGATACACG TTCGAATAAA
TCTTCGAATC AGGAATTTTA CATGCCTGCG CTAAAAGATT TTATTCTTGA TTTAAACCTG
AAAGCGAATT CCATGAATTA CCAGAAATTC CGCGCGTCCA AAATCACAAG CAAAATTGAA
TGGAACTTCC CTTATTTAAA TTTCACAAAC TCGAATTTAA TTTTCTGTAA TGGTTTTTAT
TCCGGAAAAA CTGCATTGAG AATACTGAAT GAGAAAACAG TAGAGATAAA TGCCGACGCA
CGTATCAGAG CCATGAACAT TGACAGCTTG TTTTATGTGT TTGAAAACTT CTCCCAGAAT
TTTATAACCA ATAAAAATTT AAAAGGAGAT ATTTCCGCTG ATGTAAGCTT GCTGATGCAG
GTAGACAATC ACCTAGCAAT TCTACCAAGC TCTATTATTT GTGATGCAGA TGTAACCGTA
CAAAACGGCG AGCTGAACAA TTTTGAAACA ATGAAACGTA TTGCACGTTT CCTGGATACG
GATAATTTAG ATAATATTAA ATTCTCTGAA ATGAGAAATC ATTTCTTAAT TTTTAATGAG
GAGATACAGA TTCCGGATAT GACAATCACT TCCACGGCAG GCAAAATAAG TTTCTCCGGC
AAACACAGTT TTAATGGAAA TATTGAATAT CATGTTGCTT ATCCGATCCG GAATTTAAAG
AAAGAAAAAG TTGATTCAGA TGCTGCATTT GGCGCTTTAC GTGCAGATCC AAAAGGTGAA
ATGAAATTAT TCCTTATTGT ACAGGGCACT ACTTCTGATT TTAAAATTTC TTATGACAAG
AAAAAGACAG GAGAGAAAAT CAAATCCGAT CTGCAAAAAG AAAAACAGGA ATTAAAAAAT
CTGTTTAAAA AGAAAGAGCA GGACCAGGAA GAGATCAAAA AAACACAAAC CCAGGAACAG
GAATATTTCG ATTTTGACTA G
 
Protein sequence
MLYIYKDDII YLATMQINKR LNTKVDVSKK IDISILEKFP ELSIGFHDVK CYEPGAGKPV 
IFASVKNLFI TFDIKDVWNG NYIIDKVFLE DGHIHLRTDE NGVHNFMILK KDTSTAKSNS
DFSISFIQLK NIDFIYDFRP SNHLYQSDIK ITEASLVHAR NDFTIHVTGD MHTDGIRINE
NNFLQNKDIK LSSKIRYNTE SEVFSITPST LHINTGAYAV EGLYDIKKSF VDLRFKTDKN
DIQSFVSILP KAYAASIQEY KSTGNVYFNG TIKGTASNAH SPSININFGF DHATFYHPGT
KQQITDAFLT GTYTNGDQHT LASSSVKLSD LKITIDNKPV SGYFYMNNFE DPHIDTHLKG
SVILSKILAF VPKHPFEKAS GEIDFDIEFK GRTSDLKTKA GYANIETSGD LALKNIEAKI
TSYPHTIRIA EAVCLFTKND ISIDNMELSV GKNDVVLNGI FRNLIGKIFF PNQFVYVQAD
MTMGNIFLED ILMSDTRSNK SSNQEFYMPA LKDFILDLNL KANSMNYQKF RASKITSKIE
WNFPYLNFTN SNLIFCNGFY SGKTALRILN EKTVEINADA RIRAMNIDSL FYVFENFSQN
FITNKNLKGD ISADVSLLMQ VDNHLAILPS SIICDADVTV QNGELNNFET MKRIARFLDT
DNLDNIKFSE MRNHFLIFNE EIQIPDMTIT STAGKISFSG KHSFNGNIEY HVAYPIRNLK
KEKVDSDAAF GALRADPKGE MKLFLIVQGT TSDFKISYDK KKTGEKIKSD LQKEKQELKN
LFKKKEQDQE EIKKTQTQEQ EYFDFD