| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0183 |
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| Symbol | atpA |
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| ID | 4185562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 226248 |
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| End bp | 227828 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638070192 |
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| Product | F0F1 ATP synthase subunit alpha |
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| Protein accession | YP_676815 |
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| Protein GI | 110636608 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.617939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAGACG TTAGACCTGA TGAGGTATCT GCAGTATTGA GACAGCAGTT ATCAAACTCC
TTAACCGAAG CTCAATTAGA AGAAGTAGGA ACTGTTCTTC AAGTGGGTGA TGGTGTTGCT
CGTATTTACG GCCTTACGAA GGCTCAAGCT GGTGAATTAT TAGAATTTGA AGGTGGCCTG
AAAGGGATGG TATTGAATCT TGAAGAAGAT AATGTAGGTG CCGTTTTATT GGGTGAATAC
AGTGCAATCA AAGAAGGTTC TACAGTTAAA AGAACAAAAC AGATTGCATT CGTAAATGTT
GGCGAAGGCA TGGTTGGCCG TGTTGTTGAT ACGCTTGGTA ATCCGATTGA TGGCAAAGGC
CCGATCACGG GTGAATTATA TAAAATGCCA ATGGAACGTA AAGCTCCGGG TGTTATCTAC
CGCCAGCCGG TTACAGAACC TTTACAGACT GGTATCAAAG CGATTGATGC AATGATTCCT
ATCGGTCGTG GTCAGCGTGA ATTAATCATC GGTGACCGTC AGACTGGTAA AACAACGGTT
GCATTAGATG CAATTATCAA TCAAAAAGAA TTCTACGATA GAGGTGAGCC TGTATTCTGT
ATTTATGTGG CATGTGGTCA GAAAGCATCT ACTATTGCAG GTATCGTTGG TACACTTGAA
AAGCATGGTG CAATGGCTTA TACAGTAGTA GTAGCTGCTA CTGCATCTGA TCCGGCTCCA
ATGCAATATT TCGCTCCATT CACAGGCGCT GCCGTTGGTG AGTACTTCCG TGATACTGGA
CGTCCGGCAT TGGTTGTTTA TGATGATTTG TCTAAACAGG CAGTTGCTTA CCGTGAAGTT
TCTCTTTTAT TAAGAAGACC GCCAGGGCGT GAAGCATACC CAGGTGATGT ATTTTACCTA
CACAGCCGTT TATTAGAAAG AGCCGCAAAA ATCAACAAGT CTGATGAAAT TGCAGCTGCA
ATGAACGACT TACCTGAATC ATTAAAAGGT ATTGTAAAAG GCGGCGGTTC ATTAACTGCG
TTACCAATTA TCGAAACACA AGCCGGTGAC GTTTCTGCTT ATATCCCGAC AAACGTAATT
TCTATTACAG ACGGTCAGAT CTTCTTAGAG ATCAACTTAT TCAACTCTGG TGTTCGTCCG
GCAATTAACG TAGGTATTTC GGTATCACGT GTTGGTGGTA ACGCTCAGAT CAAATCAATG
AAAAAAGTTG CCGGTACATT GAAATTAGAT CAGGCACAAT TCAGAGAATT AGAAGCGTTT
GCTAAATTCG GTTCTGATCT TGATGCTTCA ACTAAACTGA CAATTGAACG TGGTAGAAGA
AACCTTGAAA TATTGAAACA ACCTGCATTC TCTCCGGTTT CTGTTGAAGA GCAAGTTGCA
ACAATCTATG TTTCAACAAA CGGTTTCATG GATTCAGTTG TAGTAAACAA AGTACGTGAT
TTCGAAAAAG ACTTTTTAAC TGTCTTGAGA ACTTCTCACA AAGACACGTT AAAAGAAATC
AAATCCGGAA AGATTGATGA CGCTATCACA GAAGTATTGA AAAAAGTAGC AAAAGAAGTT
GCTGTAAAAT ATTCTAAATA A
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| Protein sequence | MLDVRPDEVS AVLRQQLSNS LTEAQLEEVG TVLQVGDGVA RIYGLTKAQA GELLEFEGGL
KGMVLNLEED NVGAVLLGEY SAIKEGSTVK RTKQIAFVNV GEGMVGRVVD TLGNPIDGKG
PITGELYKMP MERKAPGVIY RQPVTEPLQT GIKAIDAMIP IGRGQRELII GDRQTGKTTV
ALDAIINQKE FYDRGEPVFC IYVACGQKAS TIAGIVGTLE KHGAMAYTVV VAATASDPAP
MQYFAPFTGA AVGEYFRDTG RPALVVYDDL SKQAVAYREV SLLLRRPPGR EAYPGDVFYL
HSRLLERAAK INKSDEIAAA MNDLPESLKG IVKGGGSLTA LPIIETQAGD VSAYIPTNVI
SITDGQIFLE INLFNSGVRP AINVGISVSR VGGNAQIKSM KKVAGTLKLD QAQFRELEAF
AKFGSDLDAS TKLTIERGRR NLEILKQPAF SPVSVEEQVA TIYVSTNGFM DSVVVNKVRD
FEKDFLTVLR TSHKDTLKEI KSGKIDDAIT EVLKKVAKEV AVKYSK
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