Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0138 |
Symbol | |
ID | 4184079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 166255 |
End bp | 167136 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638070141 |
Product | hypothetical protein |
Protein accession | YP_676771 |
Protein GI | 110636564 |
COG category | [S] Function unknown |
COG ID | [COG1561] Uncharacterized stress-induced protein |
TIGRFAM ID | [TIGR00255] conserved hypothetical protein TIGR00255 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0296876 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTAAAT CAATGACAGG TTACGGTTCC CAGACTGCTG AGAACGATAA AATTTCAGTT ACTGTAGAAA TTAAATCCCT TAACTCTAAA TTTTTAGATT TAAATCTACG GCTTTCAAAA GAGTATTCTG ATAGAGAACT TGAAATAAGA AACCTGCTGA ACAATACGGT TGAGCGTGGA AAAGTGGGCT TGAGCATAGA TGTTCAATCA AAGGGAGGTG TTAAGCCAAA AGTATTTATC AATAGAGAAC TGGTTGCATT ATATTACAAA GACCTTAAGG AAACGGCTGA TGCTATAGGT ATTGTTGACT CGTCAGATTT ATTTAAGTTA GCACTGCAAA TGCCTAAGGC GATGGAATCT GAAGTTGAAA ATCCGGATAA TACGGAAGAC TGGCTGCTGA TTCAAAAAGT TTTGCTGGAT GCTATTGCCA AGTGCAATGA ATTCCGGACA GATGAAGGAA ACACACTTGC GTTAAAATTT AAGGAATATA TTAAAACGAT TGCCGACTGC TTGACTCAGG TTGAAGTATT TGACCCACAG CGCATCGAAG CTATTCGTAC ACGCATCAGA CAGCATTTTG ATGAATTCAG CAAATCCGAA CAATTAGACA ACAGCCGTTT TGAGCAGGAA TTGATTTTCT ATATTGAAAA ACTTGATATC AGCGAGGAAA AAGTGCGTTT GCGCAGCCAC TTAAATTATT TTTTAGAATC CATGGATATT CCTGAGCCTA GTGGAAAGAA ATTAGGATTC ATCGCGCAGG AGATCGGCCG TGAAATCAAT ACGATTGGTT CTAAAGCAAA TGATGCAAAT ATCCAGCGTT ATGTTGTACA GATGAAAGAG GAACTGGAAA AAATAAAAGA GCAGGCCCTA AATATTTTAT AG
|
Protein sequence | MIKSMTGYGS QTAENDKISV TVEIKSLNSK FLDLNLRLSK EYSDRELEIR NLLNNTVERG KVGLSIDVQS KGGVKPKVFI NRELVALYYK DLKETADAIG IVDSSDLFKL ALQMPKAMES EVENPDNTED WLLIQKVLLD AIAKCNEFRT DEGNTLALKF KEYIKTIADC LTQVEVFDPQ RIEAIRTRIR QHFDEFSKSE QLDNSRFEQE LIFYIEKLDI SEEKVRLRSH LNYFLESMDI PEPSGKKLGF IAQEIGREIN TIGSKANDAN IQRYVVQMKE ELEKIKEQAL NIL
|
| |