Gene CHU_0138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0138 
Symbol 
ID4184079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp166255 
End bp167136 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content38% 
IMG OID638070141 
Producthypothetical protein 
Protein accessionYP_676771 
Protein GI110636564 
COG category[S] Function unknown 
COG ID[COG1561] Uncharacterized stress-induced protein 
TIGRFAM ID[TIGR00255] conserved hypothetical protein TIGR00255 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0296876 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAT CAATGACAGG TTACGGTTCC CAGACTGCTG AGAACGATAA AATTTCAGTT 
ACTGTAGAAA TTAAATCCCT TAACTCTAAA TTTTTAGATT TAAATCTACG GCTTTCAAAA
GAGTATTCTG ATAGAGAACT TGAAATAAGA AACCTGCTGA ACAATACGGT TGAGCGTGGA
AAAGTGGGCT TGAGCATAGA TGTTCAATCA AAGGGAGGTG TTAAGCCAAA AGTATTTATC
AATAGAGAAC TGGTTGCATT ATATTACAAA GACCTTAAGG AAACGGCTGA TGCTATAGGT
ATTGTTGACT CGTCAGATTT ATTTAAGTTA GCACTGCAAA TGCCTAAGGC GATGGAATCT
GAAGTTGAAA ATCCGGATAA TACGGAAGAC TGGCTGCTGA TTCAAAAAGT TTTGCTGGAT
GCTATTGCCA AGTGCAATGA ATTCCGGACA GATGAAGGAA ACACACTTGC GTTAAAATTT
AAGGAATATA TTAAAACGAT TGCCGACTGC TTGACTCAGG TTGAAGTATT TGACCCACAG
CGCATCGAAG CTATTCGTAC ACGCATCAGA CAGCATTTTG ATGAATTCAG CAAATCCGAA
CAATTAGACA ACAGCCGTTT TGAGCAGGAA TTGATTTTCT ATATTGAAAA ACTTGATATC
AGCGAGGAAA AAGTGCGTTT GCGCAGCCAC TTAAATTATT TTTTAGAATC CATGGATATT
CCTGAGCCTA GTGGAAAGAA ATTAGGATTC ATCGCGCAGG AGATCGGCCG TGAAATCAAT
ACGATTGGTT CTAAAGCAAA TGATGCAAAT ATCCAGCGTT ATGTTGTACA GATGAAAGAG
GAACTGGAAA AAATAAAAGA GCAGGCCCTA AATATTTTAT AG
 
Protein sequence
MIKSMTGYGS QTAENDKISV TVEIKSLNSK FLDLNLRLSK EYSDRELEIR NLLNNTVERG 
KVGLSIDVQS KGGVKPKVFI NRELVALYYK DLKETADAIG IVDSSDLFKL ALQMPKAMES
EVENPDNTED WLLIQKVLLD AIAKCNEFRT DEGNTLALKF KEYIKTIADC LTQVEVFDPQ
RIEAIRTRIR QHFDEFSKSE QLDNSRFEQE LIFYIEKLDI SEEKVRLRSH LNYFLESMDI
PEPSGKKLGF IAQEIGREIN TIGSKANDAN IQRYVVQMKE ELEKIKEQAL NIL