| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0135 |
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| Symbol | tolA |
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| ID | 4184076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 161020 |
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| End bp | 164136 |
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| Gene Length | 3117 bp |
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| Protein Length | 1038 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638070138 |
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| Product | membrane spanning protein, required for outer membrane integrity |
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| Protein accession | YP_676768 |
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| Protein GI | 110636561 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3064] Membrane protein involved in colicin uptake |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.96692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0451268 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTACAAAC CGAATTTTAT TTCCTTTTCA ACTCAACAAA TACTAGGTAT GAAAAAATTC
TTAAAGATCT CTGGTATATC TATCGGAGTC TTATTATTAG CTATGCTTAT CCTGCCCTTT
TTATTCAAGG ATAAAATCAA AGGAATAATA GACGAACAGA TCAAAAAAAA TATCAACGGA
CAGGTTTGGT ATAACGCCGA ATCTTTTAGC CTGTCGCTTT TCTCTCACTT CCCGAACCTT
ACAGTCTCTA TCGATGAATT GGGATTGGTG TCGAATGTAA CAGAATTCAA AGGCGATACG
CTTTTCGCAG CAAAGCAATT CAGTTTAACA ATCGATATCA TGAGTGTTAT TTCAGGAGAT
CAGATAAAAG TTAAAGGTGT ATTTCTGGAT CAGCCTAAAA TTGTTACAAT TTTTGACAAA
AGCGGTAAGA TGAGCTGGGA TATTACTTAC CCGGATACAA CACAAGCGCC TGCTGCACCT
GAAGAACCTA GCACGCTAAA CCTGAGTATT GAAAAATGGG AAATCAAAGA TGGCACAATC
ATTTATGATG ATCAGACAAT GCCTATGTAT GCTGAACTGA AACATCTGGA CCACAAAGGT
AGCGGCGATA TAATGGCGGA TGTATATGAT CTCAAAACAT ATACAAAATC AACCAACGTA
CTTGTTGAAT ACGATGGTAC AAAATACTTA GACGGACAAA CGGTAACAGC TGATGCTGCT
ATGAATATTG ATTTAGCAAA ATCTGTTTAT AAATTTTTAG ACAATGAATT TGCTATCAAT
GATTTTAAAT TCGGGTTCAA CGGTGCTATT GAAATGCCTA CGGATGATAT CAAAATGGAT
ATCACATACA ATGCAAAAGA AACAGATTTT AAAAATTTAT TATCTCTTTT ACCTGCGGTA
TACAACAAAG ATTTTGAAAA AGTAAAAACA GAAGGTATCA TTGGTTTTGA CGGTTATGTG
AAAGGAGTTT ACAACGAAAC AACCATGCCG GGTTTTGGCT TGAACATGCT TATCAAAGAT
GGTTATTTTC AATATCCTGA CTTACCGGAT GCCGTTAAGA ATATTAATCT TGATTTACAT
GTGGACGACA AAGATGGCGT TATTGACCAT ATGATTGTTG ATCTGAAAAA ATTCCATATG
GATATGGGAC AAAACCCGAT CGATGCCAGA TTACTGATGA ATGGTATGAA TCCATATGAC
ATTGATGCAA ACGTTGTCGC CAAAGTTAAA CTTGAAGATG TTTCAAAATT CTATCCGATA
GAAGGAACAA CATTAAAAGG TCTGTTTGGA ATGGATGTTA AGGCTAAAGG CAAATACAGT
GATACTTTAA AATTAATGCC TATGGTTACG GCAAACATGA ACCTGGCAAA TGGATACGTT
AAGTCTTCGG AGTTTCCGAA ACCGATTGAA AACATCAATG TGTCCGCTGT TGTGAATAGC
GATGGAAATA TGAAGACATC GACATTCTTA TTAGATTACT TTAAACTATT GCTTGATGGC
GAACCATTTG AAATGAAAGC CTTCGTTAAA AACTTTGATG ATCCGAATTA CGAAGCAAGT
ATCAAAGGTA TTATCGACTT AGCAAAAATG ACGAAGATTT ACCCGATCGA AGGCACTACA
CTAACAGGCC GAATGAACGC AGACATGACA ACGAAAGGTA TTTTATCTGA AGTGCAGGCT
GGTAATTATG GTAATACACA AACAAGCGGA AGTCTGGATA TATCTGACTT AGTGTACAAG
AGTGTAGATT TACCTCAGGG GTATACGATG AAAAAAGGGT TGCTGACATT AACACCTGAG
CGTTTCAATA TAGCAGCGAT GGAAGGCATG CTTGGTAAAA GCGATTATAA TATTACAGGT
TATGTATCAA ACTACATGGG CTATGCATTC GGAGGGAAAG ACTCAACCAT TCATGGTGTA
ATGTCAATGG CTTCTAAAAA GTTTGATGTA AATGAATGGA TGTCAGACGA ACCAACAACA
ACACCTGCCG CTCCGGAAGA AGAAGTACCA ATGGAAGTTG TTGAGGTTCC GAAAAATATT
GACTTTACAT TTAATGCTGC CATGGACAAA GTATTGTATA GCAACATGGA TATGACCAAT
ATGAAGGGTG CTATTATCGT TCGTAATGGT ATTGTAAAAA TGGACAAGCT GAACTTTAAC
TCATTAGGAG GTTCATTCTT ATTCAGCGGC GATTATAACA CACAGGATAT CACAAAACCA
TCTTTTGCGA TGGATATGTT AATGAAAGAT GTTGCTGCAA AAGAAGCATA CAAAACATTC
AACTCTGTAA AGAAGATGGC GCCGATTGCT AACTATGTAG AAGGCAATGT TAACCTGGCT
CTTGTTATGA ATGGTTTGCT GGATAAAGAA ATGATGCCGA TTTATTCAAC ATTGAATGGG
AAAGGTTCAT TAGGCTCCAG TTCTTTAAAA GTACTAAGCA ATCCGGTATT GGGCACAGTA
GCAAGTTTAA CGAAAATGAA AAATATGGAT CCGCTGGAAA TAAAGGATCT GCTGTTGAAC
TTTACTATTG TTGACGGATC ATTAATTGTT AAACCATTTG ACATTAAATC AGGTGAATCT
AAACTTGCCA TTACAAAAGG TGAGAACAAA CTTGATGGGA GCGTGGATTA TGACATGCAG
TTAACTACTC CTTCCGGAGC GCTTGGTAAC GAAGCCAATA AAGCGATGGC AAGCCTTGTA
GGAAGCAATT TAATTACAAT GCCGAAAAAC ATTGTGATTG ACTTAAATGT AAAAGGCCCG
TATGACAAAA CAAAAGTTAC GATCGTGAAA ACGAACTTTG GAGAAGTTGA TAAAACAGCA
TTAAAAGATG CAGCAATTTC AGAATTAAAG AACAGCGATC AGGCAAAACA AGTACAGGCA
GAAATTGACA AAGCAAAAGC GGATGCTGAA GCTGAGCTTC AAAAACAGAA AGATGCGGCG
GCAGCAGAAT TGCAAAAACA GAAAGATGCC GCGGCGGCGG AATTTCAGAA ACAAAAAGAT
GCTGCTGATG CTGAACTGAA AAGACAACAG CAGATTCTTG AGCAAAAGAA AAAAGCAGCA
GCAGATTCGG CTAAGAAAGC GGCAACAGAT GCTCTTAAAA AGGGCTTCCC TAAATAA
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| Protein sequence | MYKPNFISFS TQQILGMKKF LKISGISIGV LLLAMLILPF LFKDKIKGII DEQIKKNING
QVWYNAESFS LSLFSHFPNL TVSIDELGLV SNVTEFKGDT LFAAKQFSLT IDIMSVISGD
QIKVKGVFLD QPKIVTIFDK SGKMSWDITY PDTTQAPAAP EEPSTLNLSI EKWEIKDGTI
IYDDQTMPMY AELKHLDHKG SGDIMADVYD LKTYTKSTNV LVEYDGTKYL DGQTVTADAA
MNIDLAKSVY KFLDNEFAIN DFKFGFNGAI EMPTDDIKMD ITYNAKETDF KNLLSLLPAV
YNKDFEKVKT EGIIGFDGYV KGVYNETTMP GFGLNMLIKD GYFQYPDLPD AVKNINLDLH
VDDKDGVIDH MIVDLKKFHM DMGQNPIDAR LLMNGMNPYD IDANVVAKVK LEDVSKFYPI
EGTTLKGLFG MDVKAKGKYS DTLKLMPMVT ANMNLANGYV KSSEFPKPIE NINVSAVVNS
DGNMKTSTFL LDYFKLLLDG EPFEMKAFVK NFDDPNYEAS IKGIIDLAKM TKIYPIEGTT
LTGRMNADMT TKGILSEVQA GNYGNTQTSG SLDISDLVYK SVDLPQGYTM KKGLLTLTPE
RFNIAAMEGM LGKSDYNITG YVSNYMGYAF GGKDSTIHGV MSMASKKFDV NEWMSDEPTT
TPAAPEEEVP MEVVEVPKNI DFTFNAAMDK VLYSNMDMTN MKGAIIVRNG IVKMDKLNFN
SLGGSFLFSG DYNTQDITKP SFAMDMLMKD VAAKEAYKTF NSVKKMAPIA NYVEGNVNLA
LVMNGLLDKE MMPIYSTLNG KGSLGSSSLK VLSNPVLGTV ASLTKMKNMD PLEIKDLLLN
FTIVDGSLIV KPFDIKSGES KLAITKGENK LDGSVDYDMQ LTTPSGALGN EANKAMASLV
GSNLITMPKN IVIDLNVKGP YDKTKVTIVK TNFGEVDKTA LKDAAISELK NSDQAKQVQA
EIDKAKADAE AELQKQKDAA AAELQKQKDA AAAEFQKQKD AADAELKRQQ QILEQKKKAA
ADSAKKAATD ALKKGFPK
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