Gene CHU_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0115 
Symboludk 
ID4185945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp141153 
End bp141764 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content38% 
IMG OID638070117 
Producturidine kinase 
Protein accessionYP_676748 
Protein GI110636541 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0572] Uridine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.54495 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCGC CGCTGGTTAT TGGTATCTGC GGAGGAAGTG CTTCAGGAAA AACATACCTG 
AAGGATGTTC TGATTGAAAA TAGCCCGGCT GGAAAAGTTC AGGAATTTAC ACTGGATAGT
TACTATCTTC CCCGTGAATG GCAAAAAGCA GATGCTAACG GATATCTTAA CTTCGACCTG
CCGGAAGCTT TTAATACGCA AAAAATGATT TATGATTTTA TGGACTTGTC CTCTGGTTTT
TCCATAGAAC AACCTATATA TAAGTATAAA AACGTCCCCC TTTCTATTGA TTTCAAAATT
GTAGAGCCTG CTCCGGTAAT CATTGCCGAA GGTATTTTTC TTTTTTATTA CAAAGAAATG
CGTGAACGTA TTGATAAAAA GATCTTTATT GACGCTCCTT TTGAAGTAAA ACGTCAGCGC
AGAATTGAAC GGGATGTCAG AGAACGTGGC TACGAAGTAC CCGAAATTCA CTATCGCTTT
GATAATCACG CACAAGAATC TTATAACACC TATGTTTTAC CCTATGTGCA GGAGGTTGAT
TATGTTATTG AAAACCAGCA AATGCTTGAT TCCGCTATTC CTGCTTTATT GAAGCAGATT
AAGGATTATT AA
 
Protein sequence
MKPPLVIGIC GGSASGKTYL KDVLIENSPA GKVQEFTLDS YYLPREWQKA DANGYLNFDL 
PEAFNTQKMI YDFMDLSSGF SIEQPIYKYK NVPLSIDFKI VEPAPVIIAE GIFLFYYKEM
RERIDKKIFI DAPFEVKRQR RIERDVRERG YEVPEIHYRF DNHAQESYNT YVLPYVQEVD
YVIENQQMLD SAIPALLKQI KDY