| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0040 |
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| Symbol | |
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| ID | 4186961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 50518 |
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| End bp | 53673 |
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| Gene Length | 3156 bp |
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| Protein Length | 1051 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 638070038 |
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| Product | DNA repair ATPase |
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| Protein accession | YP_676674 |
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| Protein GI | 110636467 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000057692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00102482 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATTTA AAAAAGTTGA AATACAAGCA TTTCGTGCAT ACGATAAAGT ACATGATGGA
ACATTTGATT TTACCCGTGA AGATGGTAAG AATGCTGATT TTATTTCATT ATACGCTCCT
AATGGATTTG GTAAAACATC GTTTTATGAT GCAGTTGAAT ATGGTATAAC AAATAACATT
GATCGTTTCT TAAGAAAAGG AAACGGAAAA GATACATTTA ATTCCGTTAA GTCTGAAAGA
AGCATTAGGT CAAATAATAA GAGACAATAT TTTTTAAGAA ATAATAATTC AGATGATGAT
CTTCCATCAT TTATAAAATT ATACACTGTA GCTGAAGCAT ATCCAATTGA AACTAACATA
GAGAAACCTA AAAGTAAAGC AGGTTATGAT TACAAATTTG ATCCAAGCGC AACTATAAAT
AAAGAATTTA AAACAGTCAT TTTATCACAG GAATGGATTG ATGCTTTTTT AAAAGAAGAT
AAACCAGAAG ATAGATATGA GAGATTTATC GAATATTTTG GAGATAAAAA TATTGATGAA
TATTATAATA AATTAATAAG CCTAATTGCT TTAAATAATA AGAATATAGA AGCGCTTACG
AAAGTGTTAA GCGGTATACA ACTAGAGTTA AAGTTTGGGG GAGACAAAGA TATTCTCAAA
AAGGTGAATG AAACAATTAT TTCACTTAAC AAAGTAGGGG AAAATTTAAA AGAGATTGAT
GAATCTTATT CAGAAACTGA CGCTCTTAAT CTTTCAAATA AAATATCCGA AAGAAAAGTT
GATTTAGATT TTGAAATCAA AAAGGCAACC GAACACATGA AGTACTTAGA TATTTTCTAT
GTAGGCAATG AAGAGGTTGC AGGACTGGCT AAATATTTTG AATCAAAAAT AAAAATTGAG
CAAGTTGATA ATCAATACAA AGAAAATCTC TCTATTCTTG AAAAATTTGA TAAAAAACAA
AAATGCGTTA ACGAAATTGA TTCGATTAAA TCACAAAACA ATGAAATAGG AACTAAAAAA
CAAAATCTTG AATCATTACA AAAAGACTTA AAAGAGTATG AAAAAATTGC TCAAGAAATT
GCATCTGGAA AAGAAAAAAG TGAATTATTA AAAAAAGAAT TATCAGCCCT AACGCTAAAT
ATAGATGCCC TTAATGAAAA GGAAAGCGAA AATAGATCCA AACAAAGTTC TTTACAAAAT
CAAATTTTAG AGTTAGAAAA AAGTATTTCA GAAATTCCAA AACTTTCAGA AGACTATAAT
AATTATAATC TAAAACTTAA AGAATCTCAA ACAAAACTTG ATAAAGTTGA ACCTGAAATC
AAAAGTTTAG AACAAAAGAA AAGTTTATTA GAAATATCAA TAAATAATTT ACAGAAATCT
ATTCAAGAGA TAAATGCTGG TACATATCCA TCTATTTCGG ATGAATTGTA TTCTAACAAT
GCGGAAATCA TTGAGGCACT TATCGGAATT GAAAAGTCAA TAACTATAGA ACATGAAAAT
CTACATGCAA TTAATTCTAA TATACAAACA AGCGAAAATT TTAAAAAAGA AATTGAACAG
TTCATTTCAA AGGGATCTGA AATAGTACAT AAAAGTCAAA CCAGCTCTTG CCCATTATGT
GAGCAACAAT ATGAATCTTT TAGTGTATTA GCTTCGAAAA TATCTAATAA CAGCCTCCTG
TCAAATATTC TTTCTGGCTT ATTAAAGGAT AGAGATGATA AAAACAAGAA TATTGCTCAG
TTGAATGAGT CATTAAAATC GAATAGGCAA CAGCTCGTGG CCGAAATCAC TAAGAAACTA
GAAGAAACAG AAATAGAACG TGCAAAATTA TTAGAAAATT TTAAAAAATA TATTGATTTT
AAATCCGAAA TTATCAAAGA AATAGAATTA TATAATAAAC CTCTGAATGA CCTAGATTTA
AAATTAAATG AAAAGACGTT TGAAGTTTTC GAAAAAGAAT CCAAAGATAC TCTAGAAGAG
CTAAAATCAG AATTGACTTC ATGCATCAGA AGAGATGAAG AATTAAAAAA ATCTGTTATT
GACGAATCAT TAAATTTAGA TATTAAAAAA ATTAAATCTT CCCACAATTT AACGAAACTA
GATAGGCTTA GTAAAGAACC TATTTATTTA AAGATCGTTG AGTATTTTAA AATAAATTAT
CCTGAAGCAA TAATCGCCGA TAAACCATTA TCTGACGAAA TAATATTGAT AACACATAAT
TTAGAATCGA ATGTTGACAG AGAAATAAAG TTGAACGAAG AAATTGCAGA TCTCAATATT
ATACTAAAAG CATTTACAGT TGAGGGTGTT CAAAAAAACA ATGAACTAAT AAGCGAAACC
AAAAATATAT ACGTTAAAAT AATAAATTCA TTTGAGCAAG AAGTTCGATC AAAGTTGAAT
ATTGAATTAA ATGGGCACAC AATTGATTCA TTTTCTAATT TTTTAGATAG TAATAAAAAC
AACAGTAAGG ATAAAATTGT CAAACATGAA TTGATAATAA AAGACTATGA TCTACTATCT
CAATTCAAAG AAAACGTTAC TCCATTTTTG AAATACGAGA AAGCGAAAGT TAAAGAGAAG
GATACTAAAG ATAGAATTCA GTTTTTAAAA ACTAAAATAT CTAGTGAATT AGAAAAGGAA
TTGCAAAATG TGTCTGAATA TTTGACTCAA CAAATAGATT CATTCTTTTA TGAAGGCTTG
ATAAATGAAT TGTACAGAAA AATAGATCCA CATCCTGATT ATAAGACAGT AACCTTTAGA
TGTGATTTTT CGGACACAAA GCCAAAATTG AATGTTTGTG TTTATCAGGA AAATGAAGAT
GAGTTAATAA TTCCAAATCT TTACTTTAGT ACCGCGCAAT TAAATATATT AAGTTTAAGT
ATATTTTTGG CAAAGGCATT AAATGCTAAA GATGATAAGG GAAAACCATT TGACTGCATT
TTTATTGATG ATCCAATTCA ATCAATGGAT AGCATCAACA TTCTTTCTAC AATCGACTTA
ATAAGAAGTA TTGTTGTAAA CCATAAAAAA CAAATAATAC TTTCTACGCA TGACGAAAAT
TTTCATAATC TTTTGAAGAA AAAAATGCCA ACAAATTTAT TCAATTCTAA ATTTATGGAA
CTTGAAAGTT TTGGTAAGGT AAAAAATGAT ATTTAA
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| Protein sequence | MKFKKVEIQA FRAYDKVHDG TFDFTREDGK NADFISLYAP NGFGKTSFYD AVEYGITNNI
DRFLRKGNGK DTFNSVKSER SIRSNNKRQY FLRNNNSDDD LPSFIKLYTV AEAYPIETNI
EKPKSKAGYD YKFDPSATIN KEFKTVILSQ EWIDAFLKED KPEDRYERFI EYFGDKNIDE
YYNKLISLIA LNNKNIEALT KVLSGIQLEL KFGGDKDILK KVNETIISLN KVGENLKEID
ESYSETDALN LSNKISERKV DLDFEIKKAT EHMKYLDIFY VGNEEVAGLA KYFESKIKIE
QVDNQYKENL SILEKFDKKQ KCVNEIDSIK SQNNEIGTKK QNLESLQKDL KEYEKIAQEI
ASGKEKSELL KKELSALTLN IDALNEKESE NRSKQSSLQN QILELEKSIS EIPKLSEDYN
NYNLKLKESQ TKLDKVEPEI KSLEQKKSLL EISINNLQKS IQEINAGTYP SISDELYSNN
AEIIEALIGI EKSITIEHEN LHAINSNIQT SENFKKEIEQ FISKGSEIVH KSQTSSCPLC
EQQYESFSVL ASKISNNSLL SNILSGLLKD RDDKNKNIAQ LNESLKSNRQ QLVAEITKKL
EETEIERAKL LENFKKYIDF KSEIIKEIEL YNKPLNDLDL KLNEKTFEVF EKESKDTLEE
LKSELTSCIR RDEELKKSVI DESLNLDIKK IKSSHNLTKL DRLSKEPIYL KIVEYFKINY
PEAIIADKPL SDEIILITHN LESNVDREIK LNEEIADLNI ILKAFTVEGV QKNNELISET
KNIYVKIINS FEQEVRSKLN IELNGHTIDS FSNFLDSNKN NSKDKIVKHE LIIKDYDLLS
QFKENVTPFL KYEKAKVKEK DTKDRIQFLK TKISSELEKE LQNVSEYLTQ QIDSFFYEGL
INELYRKIDP HPDYKTVTFR CDFSDTKPKL NVCVYQENED ELIIPNLYFS TAQLNILSLS
IFLAKALNAK DDKGKPFDCI FIDDPIQSMD SINILSTIDL IRSIVVNHKK QIILSTHDEN
FHNLLKKKMP TNLFNSKFME LESFGKVKND I
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