Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0040 |
Symbol | |
ID | 4186961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 50518 |
End bp | 53673 |
Gene Length | 3156 bp |
Protein Length | 1051 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 638070038 |
Product | DNA repair ATPase |
Protein accession | YP_676674 |
Protein GI | 110636467 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0419] ATPase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000057692 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00102482 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAATTTA AAAAAGTTGA AATACAAGCA TTTCGTGCAT ACGATAAAGT ACATGATGGA ACATTTGATT TTACCCGTGA AGATGGTAAG AATGCTGATT TTATTTCATT ATACGCTCCT AATGGATTTG GTAAAACATC GTTTTATGAT GCAGTTGAAT ATGGTATAAC AAATAACATT GATCGTTTCT TAAGAAAAGG AAACGGAAAA GATACATTTA ATTCCGTTAA GTCTGAAAGA AGCATTAGGT CAAATAATAA GAGACAATAT TTTTTAAGAA ATAATAATTC AGATGATGAT CTTCCATCAT TTATAAAATT ATACACTGTA GCTGAAGCAT ATCCAATTGA AACTAACATA GAGAAACCTA AAAGTAAAGC AGGTTATGAT TACAAATTTG ATCCAAGCGC AACTATAAAT AAAGAATTTA AAACAGTCAT TTTATCACAG GAATGGATTG ATGCTTTTTT AAAAGAAGAT AAACCAGAAG ATAGATATGA GAGATTTATC GAATATTTTG GAGATAAAAA TATTGATGAA TATTATAATA AATTAATAAG CCTAATTGCT TTAAATAATA AGAATATAGA AGCGCTTACG AAAGTGTTAA GCGGTATACA ACTAGAGTTA AAGTTTGGGG GAGACAAAGA TATTCTCAAA AAGGTGAATG AAACAATTAT TTCACTTAAC AAAGTAGGGG AAAATTTAAA AGAGATTGAT GAATCTTATT CAGAAACTGA CGCTCTTAAT CTTTCAAATA AAATATCCGA AAGAAAAGTT GATTTAGATT TTGAAATCAA AAAGGCAACC GAACACATGA AGTACTTAGA TATTTTCTAT GTAGGCAATG AAGAGGTTGC AGGACTGGCT AAATATTTTG AATCAAAAAT AAAAATTGAG CAAGTTGATA ATCAATACAA AGAAAATCTC TCTATTCTTG AAAAATTTGA TAAAAAACAA AAATGCGTTA ACGAAATTGA TTCGATTAAA TCACAAAACA ATGAAATAGG AACTAAAAAA CAAAATCTTG AATCATTACA AAAAGACTTA AAAGAGTATG AAAAAATTGC TCAAGAAATT GCATCTGGAA AAGAAAAAAG TGAATTATTA AAAAAAGAAT TATCAGCCCT AACGCTAAAT ATAGATGCCC TTAATGAAAA GGAAAGCGAA AATAGATCCA AACAAAGTTC TTTACAAAAT CAAATTTTAG AGTTAGAAAA AAGTATTTCA GAAATTCCAA AACTTTCAGA AGACTATAAT AATTATAATC TAAAACTTAA AGAATCTCAA ACAAAACTTG ATAAAGTTGA ACCTGAAATC AAAAGTTTAG AACAAAAGAA AAGTTTATTA GAAATATCAA TAAATAATTT ACAGAAATCT ATTCAAGAGA TAAATGCTGG TACATATCCA TCTATTTCGG ATGAATTGTA TTCTAACAAT GCGGAAATCA TTGAGGCACT TATCGGAATT GAAAAGTCAA TAACTATAGA ACATGAAAAT CTACATGCAA TTAATTCTAA TATACAAACA AGCGAAAATT TTAAAAAAGA AATTGAACAG TTCATTTCAA AGGGATCTGA AATAGTACAT AAAAGTCAAA CCAGCTCTTG CCCATTATGT GAGCAACAAT ATGAATCTTT TAGTGTATTA GCTTCGAAAA TATCTAATAA CAGCCTCCTG TCAAATATTC TTTCTGGCTT ATTAAAGGAT AGAGATGATA AAAACAAGAA TATTGCTCAG TTGAATGAGT CATTAAAATC GAATAGGCAA CAGCTCGTGG CCGAAATCAC TAAGAAACTA GAAGAAACAG AAATAGAACG TGCAAAATTA TTAGAAAATT TTAAAAAATA TATTGATTTT AAATCCGAAA TTATCAAAGA AATAGAATTA TATAATAAAC CTCTGAATGA CCTAGATTTA AAATTAAATG AAAAGACGTT TGAAGTTTTC GAAAAAGAAT CCAAAGATAC TCTAGAAGAG CTAAAATCAG AATTGACTTC ATGCATCAGA AGAGATGAAG AATTAAAAAA ATCTGTTATT GACGAATCAT TAAATTTAGA TATTAAAAAA ATTAAATCTT CCCACAATTT AACGAAACTA GATAGGCTTA GTAAAGAACC TATTTATTTA AAGATCGTTG AGTATTTTAA AATAAATTAT CCTGAAGCAA TAATCGCCGA TAAACCATTA TCTGACGAAA TAATATTGAT AACACATAAT TTAGAATCGA ATGTTGACAG AGAAATAAAG TTGAACGAAG AAATTGCAGA TCTCAATATT ATACTAAAAG CATTTACAGT TGAGGGTGTT CAAAAAAACA ATGAACTAAT AAGCGAAACC AAAAATATAT ACGTTAAAAT AATAAATTCA TTTGAGCAAG AAGTTCGATC AAAGTTGAAT ATTGAATTAA ATGGGCACAC AATTGATTCA TTTTCTAATT TTTTAGATAG TAATAAAAAC AACAGTAAGG ATAAAATTGT CAAACATGAA TTGATAATAA AAGACTATGA TCTACTATCT CAATTCAAAG AAAACGTTAC TCCATTTTTG AAATACGAGA AAGCGAAAGT TAAAGAGAAG GATACTAAAG ATAGAATTCA GTTTTTAAAA ACTAAAATAT CTAGTGAATT AGAAAAGGAA TTGCAAAATG TGTCTGAATA TTTGACTCAA CAAATAGATT CATTCTTTTA TGAAGGCTTG ATAAATGAAT TGTACAGAAA AATAGATCCA CATCCTGATT ATAAGACAGT AACCTTTAGA TGTGATTTTT CGGACACAAA GCCAAAATTG AATGTTTGTG TTTATCAGGA AAATGAAGAT GAGTTAATAA TTCCAAATCT TTACTTTAGT ACCGCGCAAT TAAATATATT AAGTTTAAGT ATATTTTTGG CAAAGGCATT AAATGCTAAA GATGATAAGG GAAAACCATT TGACTGCATT TTTATTGATG ATCCAATTCA ATCAATGGAT AGCATCAACA TTCTTTCTAC AATCGACTTA ATAAGAAGTA TTGTTGTAAA CCATAAAAAA CAAATAATAC TTTCTACGCA TGACGAAAAT TTTCATAATC TTTTGAAGAA AAAAATGCCA ACAAATTTAT TCAATTCTAA ATTTATGGAA CTTGAAAGTT TTGGTAAGGT AAAAAATGAT ATTTAA
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Protein sequence | MKFKKVEIQA FRAYDKVHDG TFDFTREDGK NADFISLYAP NGFGKTSFYD AVEYGITNNI DRFLRKGNGK DTFNSVKSER SIRSNNKRQY FLRNNNSDDD LPSFIKLYTV AEAYPIETNI EKPKSKAGYD YKFDPSATIN KEFKTVILSQ EWIDAFLKED KPEDRYERFI EYFGDKNIDE YYNKLISLIA LNNKNIEALT KVLSGIQLEL KFGGDKDILK KVNETIISLN KVGENLKEID ESYSETDALN LSNKISERKV DLDFEIKKAT EHMKYLDIFY VGNEEVAGLA KYFESKIKIE QVDNQYKENL SILEKFDKKQ KCVNEIDSIK SQNNEIGTKK QNLESLQKDL KEYEKIAQEI ASGKEKSELL KKELSALTLN IDALNEKESE NRSKQSSLQN QILELEKSIS EIPKLSEDYN NYNLKLKESQ TKLDKVEPEI KSLEQKKSLL EISINNLQKS IQEINAGTYP SISDELYSNN AEIIEALIGI EKSITIEHEN LHAINSNIQT SENFKKEIEQ FISKGSEIVH KSQTSSCPLC EQQYESFSVL ASKISNNSLL SNILSGLLKD RDDKNKNIAQ LNESLKSNRQ QLVAEITKKL EETEIERAKL LENFKKYIDF KSEIIKEIEL YNKPLNDLDL KLNEKTFEVF EKESKDTLEE LKSELTSCIR RDEELKKSVI DESLNLDIKK IKSSHNLTKL DRLSKEPIYL KIVEYFKINY PEAIIADKPL SDEIILITHN LESNVDREIK LNEEIADLNI ILKAFTVEGV QKNNELISET KNIYVKIINS FEQEVRSKLN IELNGHTIDS FSNFLDSNKN NSKDKIVKHE LIIKDYDLLS QFKENVTPFL KYEKAKVKEK DTKDRIQFLK TKISSELEKE LQNVSEYLTQ QIDSFFYEGL INELYRKIDP HPDYKTVTFR CDFSDTKPKL NVCVYQENED ELIIPNLYFS TAQLNILSLS IFLAKALNAK DDKGKPFDCI FIDDPIQSMD SINILSTIDL IRSIVVNHKK QIILSTHDEN FHNLLKKKMP TNLFNSKFME LESFGKVKND I
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