| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0021 |
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| Symbol | |
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| ID | 4183670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 22563 |
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| End bp | 24344 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638070019 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_676655 |
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| Protein GI | 110636448 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.42905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTATCGC ATAACTCAAT GAGTTTAAAC AGACACATTT TAAAAACAAT TCTTTTTGCA
ATTCTCATGC CGGTGCTTTC AGTACCGGCA TTGGCGCAAA AAAGCCCTAA GGCAAAAAAA
GTAAAGGCAG ACAAGACTAC TTATAGTCCG AAGGTTCTTT CTGAGCAGGA TCGTATTTAT
TTCGAAGCAT ATTTTATCGA AGGAATGCGT TATTATTTGA TCGGGCAAAC AAAAGTTGCC
TTGTCATTTT TTGACAAAGC GTATTCGTTG GATCAGACGA ATGGTGGCTT AAATTACCAG
CTTTCAAAAG TTAATTACAG TTTATCAAAC AATGCACGTG CATTGTTAAA TGCGCAGACG
GCAGTAAAGG CTGATTCTAA AAATCAGGAA TATCTTATTC AGCTTGCAAA GGTTTATGAA
GTTCAATCAA ATTTTGAAGA AGCCAATAAA GTCTATAAAA AATTAACCAC GGATTTCCCG
AATAACGAAC CATACTACTA CCAGATAGGC GCAAATCAGA TTCAGCTTAA ACAGTATGAT
GAAGCAATTA AAACATATAG CAAAGTAGAA TCTATTTTTG GCAGAAGCTT TGAGTTGACC
AGACAGAAAC AACAGCTTTA TGTAAAACAG GGTAAAGTTG ACCTGGCAAT AAAAGAAGGT
CAGGTGCTTA TTGATTCCGA TCCGTCAAAT CTGCAATACC AGGTTGACCA GGCTGAATTT
TATTATTATA TCGATCAGGT GCCGAATGCA CTGGCGATTA TTGATAAGGT TTTAAAACAA
GACAAAGATC AGGTGCAGGC GCACGTGTTA CTGGCCGATA TTTATAAATC TAAAAACGAA
ATGGACAAGG CGTTTGTAGA ATATAAATAT TTACTGGCTC GCCCGAATGT TGCCGGCGAA
ACAAAAAAGC AAATTGTTCA GGAAGCATTA ACCAATGCAA CAACAGATGC TGCAAAGGCG
CAATTGCTGG AACTTACTAC CATTTACGTT ACAACAAACC CTTCAGACAA TGTTGCCTTA
ACAAGTCAGG GAGATGCTTT ATTCGTCAAC AATAAAAAAG AAGAAGCGCG AAAATATTAT
TCAAAGTCTG CACAGCTTGA CGGCAATAAT TATAATCTCT GGCTGCAGAT ACTGACATTG
GATTTTGAGT TTAAGGAATA CGATACACTT GTTGCGCATA GTGCAACAGC AATAGACTTC
TTTCCTAATC AGTCAAACTT ATGGTATTTC AGAGGACTTG CTTTCTTTAA TCTGAAAAGA
TATCCCCAAT CGATTGAAGC GTTAGAAGAG ACCAGAAATT TATCCGGAAC AAATCAGGCA
CTGAAAATGC AATCGCTTTT ATTGCTTGCA GATGCGTACA ATGAAACGAA GGAATATGTT
AAGTCTGACG CTGCTTACGA TGAAGTATTG AAGTACGATA AAAATAACGA TCATGCGTTA
AACAACTATA GCTACTATCT TTCTCTGAGG AAAGAAAAAT TAGAACTGGC TAAAAGCATG
TCAGAAAAAG TTGTGAACCG AAATCCAACG GAAGCAAACT TTATTGATAC ATATGCCTGG
GTGTTGTATC AGATGAAAGA TTATCAGGGC GCAAAAGTGC AGTTAGAAAA AGCAGTTGCG
GCAGGCTCTA CAAACGGAAC AATTCTGGAA CATTATGGTG ATGTATTGTT TCAATTGGGA
GATAAAAAAG GCGCATTGGA AAATTGGAAA AAAGCGAAAG CTGCGGGTGA TGCATCTGCA
TTGATTGATA AAAAAATTGC CGACGGCAAG TTGTATGAAT AA
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| Protein sequence | MLSHNSMSLN RHILKTILFA ILMPVLSVPA LAQKSPKAKK VKADKTTYSP KVLSEQDRIY
FEAYFIEGMR YYLIGQTKVA LSFFDKAYSL DQTNGGLNYQ LSKVNYSLSN NARALLNAQT
AVKADSKNQE YLIQLAKVYE VQSNFEEANK VYKKLTTDFP NNEPYYYQIG ANQIQLKQYD
EAIKTYSKVE SIFGRSFELT RQKQQLYVKQ GKVDLAIKEG QVLIDSDPSN LQYQVDQAEF
YYYIDQVPNA LAIIDKVLKQ DKDQVQAHVL LADIYKSKNE MDKAFVEYKY LLARPNVAGE
TKKQIVQEAL TNATTDAAKA QLLELTTIYV TTNPSDNVAL TSQGDALFVN NKKEEARKYY
SKSAQLDGNN YNLWLQILTL DFEFKEYDTL VAHSATAIDF FPNQSNLWYF RGLAFFNLKR
YPQSIEALEE TRNLSGTNQA LKMQSLLLLA DAYNETKEYV KSDAAYDEVL KYDKNNDHAL
NNYSYYLSLR KEKLELAKSM SEKVVNRNPT EANFIDTYAW VLYQMKDYQG AKVQLEKAVA
AGSTNGTILE HYGDVLFQLG DKKGALENWK KAKAAGDASA LIDKKIADGK LYE
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