Gene Meso_4094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_4094 
Symbol 
ID4182794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp4405383 
End bp4405904 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content60% 
IMG OID638069990 
Productpeptidase A24A, prepilin type IV 
Protein accessionYP_676626 
Protein GI110636418 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4960] Flp pilus assembly protein, protease CpaA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGAAG CAGCGATCCT GGTCATCTTT CCTTTCTGCA TGGCCTTTGC AGCGGTCTCC 
GACATGATAT CGCTGACGAT AGCCAATCGC GTATCGATCC TGCTCGTCCT CTCCTTCGCG
GTGCTTGCAC CTTTGGTCGG CATGCCCGTT GCGGAAATCG GGATGCATTT CCTGCTTGGG
GGAACGGTGC TCCTCGCAAC ATTCGCAGTC TTCGCGATCG GCGGTATGGG AGGCGGAGAC
GCGAAGCTGA TGGCTGCGAG CGCGGTGTGG TTCGGCTTCA ATCCCGGTCT GATGGATTAC
CTGCTGGCGA CCGCGCTTTT GGGCGGAGCG CTCACGCTCG CGCTTGTATC TTTCAGGCGA
TCGGCTTTCT CGCCACTGGT CGCACATCAT GTTCTGCTGC GCCATTTCGC GGAAGAAAAG
TCCGGCATCC CCTATGGCGT GGCACTCGGA TTGGGTGGCC TGATCTGCTT TCCGCAGACA
CCACTGATGC AATGGGCCAT GGAGCGCCTC GCGGCTGGGT AG
 
Protein sequence
MVEAAILVIF PFCMAFAAVS DMISLTIANR VSILLVLSFA VLAPLVGMPV AEIGMHFLLG 
GTVLLATFAV FAIGGMGGGD AKLMAASAVW FGFNPGLMDY LLATALLGGA LTLALVSFRR
SAFSPLVAHH VLLRHFAEEK SGIPYGVALG LGGLICFPQT PLMQWAMERL AAG