Gene Meso_3975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3975 
Symbol 
ID4183027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp4280580 
End bp4281311 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content56% 
IMG OID638069870 
ProductABC transporter related 
Protein accessionYP_676507 
Protein GI110636299 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.154749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGAGA ACATCGTTGA TTTCAAAGGT GTAAGGAAGA GCTTTGGAGC GCTTGAGGTC 
CTTAGGGGCA TCGATCTGCG ATTGGAAGCG GGCGAGGTCG TCGCGCTCAT TGGTCGCAGC
GGTTCCGGTA AGAGCACGGC GCTGCGATGC GTAAATGGCC TTGAGCAGAT TAATGCGGGG
CAACTGACAG TCTGCGGGCA TCATCTTCAT GTGCCTGAAG TTGACCTGCG CGCCTTGCGT
CGAGAGGTCG GGATTGTTTT TCAGGGCTAC AATCTTTTTC CCCACCTCAC TGTCGCACAG
AACGTGATGC TTGCTCCGCG CAAGGTTAAG AAGATCGGGC TCGGTGAAGC GCGTGATCTT
GCAGGCGAAG TGCTGGCGCA AGTGGGTCTT TCGGAGAAAC TCGATTCTTA TCCGAACCAA
CTCTCGGGTG GGCAACAACA GCGGGTAGCA ATTGCAAGGT CGCTTGCGAT GCGGCCTCGC
CTAATGCTTT TCGATGAGGT GACTTCGGCG CTGGACCCGG AGCTGACCGG CGAAGTTCTA
AAGACGATTG AGAGGCTGGC TTGTGACGGG ATGACCATGC TGATCGTTAC CCACGAAATG
GCCTTCGCAA GCTCTGTGGC AACCAGCATC GTCTTCATGC ACCAGGGCAC TGTGTGGGAG
CGCGGATCGC GCAACCTCCT GTCGCAGGCA GCGACACCTG AACTCAGGCA GTTCATAGGA
AACGGGTTGT AG
 
Protein sequence
MGENIVDFKG VRKSFGALEV LRGIDLRLEA GEVVALIGRS GSGKSTALRC VNGLEQINAG 
QLTVCGHHLH VPEVDLRALR REVGIVFQGY NLFPHLTVAQ NVMLAPRKVK KIGLGEARDL
AGEVLAQVGL SEKLDSYPNQ LSGGQQQRVA IARSLAMRPR LMLFDEVTSA LDPELTGEVL
KTIERLACDG MTMLIVTHEM AFASSVATSI VFMHQGTVWE RGSRNLLSQA ATPELRQFIG
NGL