Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3951 |
Symbol | |
ID | 4180256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 4255513 |
End bp | 4256373 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638069845 |
Product | NLP/P60 |
Protein accession | YP_676483 |
Protein GI | 110636275 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.613547 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCAAGC CAGATCGTCG TCTGAATGCC TACAGGCCGG ATCTGGCGGA TGAGCGGCTT CGCGGGCAAG TGGATGCCGC GCGTTTCGTT GCCGGGCACC CCGCGTCCAT TACCGCACCC GTGGTTGACG TGCATGCGAC GCCCGATCAG GCCTCCGGCA TCGACACGCA ATTCCTTCAC GGCGATTCGG TGCTGGTTTT CGATCGCCGT CAGGGCTGGG CTTGGGTGCA GGGAACCCGA GACGGCTATG TGGGCTATAT CCGGGAATCC TCCCTCGGCG CCTCGGGCTT TCAGCATACG CATGTGCTGT CGGTCCCGCG CAGCTTCGTC TATCCCGAGC CGGAACTGAA AACCCCTCCG CTTGCAGCCT TCAGCATGGG CGCGCGCGTC ATCGTGGTCG AGGAAGTGGA GAAGCGCGGA ACGCGCTATG CGCTGCTGGC CTCCGGCGGC GCCATGGTTG CCGGACATCT GCGCCCGGTC GGCCAGCCGG AAAGCGATTA CGTTTCAGTT GCAGAGAAAT TTCTCCACAC TCCCTATCTC TGGGGTGGTG CGAGCGGGTT CGGCATCGAC TGCTCCGGCC TCGTTCAGCT CTCGATGTTC ATGGCGGGCC GCCAGGCTTC GCGCGATACC GATATGCAGG CAAATTATCT CGGGACACCG GTTGATCCTG CAGAAGGACT GATACGGGGC GACCTGGTTT TCTGGCGAGG GCATGTGGCC ATCATGACGG ACAGCCAGAC CATCATTCAC GCCAATGGCT ACACAATGTC GGTTTCATGC GAACGGCTTG CGGATGCAAT CCGTCGCATC GAGCCTTTTT ATGGAAAACC GACCGGCTTT CGCAGACCGG AACAGCCCTG A
|
Protein sequence | MSKPDRRLNA YRPDLADERL RGQVDAARFV AGHPASITAP VVDVHATPDQ ASGIDTQFLH GDSVLVFDRR QGWAWVQGTR DGYVGYIRES SLGASGFQHT HVLSVPRSFV YPEPELKTPP LAAFSMGARV IVVEEVEKRG TRYALLASGG AMVAGHLRPV GQPESDYVSV AEKFLHTPYL WGGASGFGID CSGLVQLSMF MAGRQASRDT DMQANYLGTP VDPAEGLIRG DLVFWRGHVA IMTDSQTIIH ANGYTMSVSC ERLADAIRRI EPFYGKPTGF RRPEQP
|
| |