Gene Meso_3859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3859 
Symbol 
ID4182450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp4160659 
End bp4161645 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content66% 
IMG OID638069751 
Productconjugal transfer protein TrbG/VirB9/CagX 
Protein accessionYP_676391 
Protein GI110636183 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3504] Type IV secretory pathway, VirB9 components 
TIGRFAM ID[TIGR02775] P-type conjugative transfer protein TrbG 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0174658 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGATT CGACCATACT CGCGCATGGG CGCAAGGCCG TCCGCGCCAG TATCCTCCTC 
GCAGCGCTGG CATCGGCCAC CGCGCTTACC GGCTGCGCAA CGGCGCCGCG ACCGCCGCAC
ATCACCTACG ATGCCGACGT GCCCCCATTG CCCGTGGTGC CCGCCGCCGT CACCGACGAG
ACGCCCCGCC CAATCCACGT CCCGCCCGCC TGGTCACCGG CGACGGGCGG GACAGCCGCC
TCGACGCCGA CGGCCCGCGT CGAAAACGCC AATCTCGCCG CACGTGTCGA GCCTCGGCGT
GAAGGCTACT ACAATGCGAT CCAGATTTAT CCGTGGAGCG AAGGCGCGCT CTATCAGGTC
TACGCGGCTC CCGGCCAGAT CACCACCATC GCGCTGGAGC CCGGCGAGAG CCTGACCGGC
GCCGGTCCGA TCGCGGCGGG CGACACGGCG CGCTGGATAA TTGGGGATAC GGAAAGCGGC
TCTGGCCCAA ACCGCCGCGT GCATGTTCTG GTCAAGCCGA CCCGGCCTGA CATCACCACG
AACCTTGTCG TCAGCACGGA CCGACGCGTT TACCTGATCG AATTGCGCTC CGGCGAAAAT
CCCTACATGC CGGCAGTCGC CTGGGCCTAT CCCACACCTC CGGCCTCGCA ACGCCAGACC
GCTCCCGCCG CACCGATCAT CCCGGCTGTT GCGTCGCGCA ACTACCGCTA CGGCCTCACC
GGCGATGCAC CTCCGTGGCG TCCGATCTCG GTCTATGACG ACGGCCGGAG GGTCTATATA
GAGTTCCCGC GCGGCATCGT GCAGGGCGAG ATGCCGCCGA TCTTCGTCAT CGGCTCGGAC
GGTCAGCCAG AAATCGTCAA TAGCCGCGTC CACAACAACA TCCTGATCGT GGATCGCCTT
TTCGGGGCGG CCGAACTTCG GCTTGGCAGC GGCAATCGCC AGCAAATCGT GCGGATCGTC
AGGACTGACG GGAGGCCGAC GACATGA
 
Protein sequence
MNDSTILAHG RKAVRASILL AALASATALT GCATAPRPPH ITYDADVPPL PVVPAAVTDE 
TPRPIHVPPA WSPATGGTAA STPTARVENA NLAARVEPRR EGYYNAIQIY PWSEGALYQV
YAAPGQITTI ALEPGESLTG AGPIAAGDTA RWIIGDTESG SGPNRRVHVL VKPTRPDITT
NLVVSTDRRV YLIELRSGEN PYMPAVAWAY PTPPASQRQT APAAPIIPAV ASRNYRYGLT
GDAPPWRPIS VYDDGRRVYI EFPRGIVQGE MPPIFVIGSD GQPEIVNSRV HNNILIVDRL
FGAAELRLGS GNRQQIVRIV RTDGRPTT