Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3859 |
Symbol | |
ID | 4182450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 4160659 |
End bp | 4161645 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638069751 |
Product | conjugal transfer protein TrbG/VirB9/CagX |
Protein accession | YP_676391 |
Protein GI | 110636183 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0174658 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGATT CGACCATACT CGCGCATGGG CGCAAGGCCG TCCGCGCCAG TATCCTCCTC GCAGCGCTGG CATCGGCCAC CGCGCTTACC GGCTGCGCAA CGGCGCCGCG ACCGCCGCAC ATCACCTACG ATGCCGACGT GCCCCCATTG CCCGTGGTGC CCGCCGCCGT CACCGACGAG ACGCCCCGCC CAATCCACGT CCCGCCCGCC TGGTCACCGG CGACGGGCGG GACAGCCGCC TCGACGCCGA CGGCCCGCGT CGAAAACGCC AATCTCGCCG CACGTGTCGA GCCTCGGCGT GAAGGCTACT ACAATGCGAT CCAGATTTAT CCGTGGAGCG AAGGCGCGCT CTATCAGGTC TACGCGGCTC CCGGCCAGAT CACCACCATC GCGCTGGAGC CCGGCGAGAG CCTGACCGGC GCCGGTCCGA TCGCGGCGGG CGACACGGCG CGCTGGATAA TTGGGGATAC GGAAAGCGGC TCTGGCCCAA ACCGCCGCGT GCATGTTCTG GTCAAGCCGA CCCGGCCTGA CATCACCACG AACCTTGTCG TCAGCACGGA CCGACGCGTT TACCTGATCG AATTGCGCTC CGGCGAAAAT CCCTACATGC CGGCAGTCGC CTGGGCCTAT CCCACACCTC CGGCCTCGCA ACGCCAGACC GCTCCCGCCG CACCGATCAT CCCGGCTGTT GCGTCGCGCA ACTACCGCTA CGGCCTCACC GGCGATGCAC CTCCGTGGCG TCCGATCTCG GTCTATGACG ACGGCCGGAG GGTCTATATA GAGTTCCCGC GCGGCATCGT GCAGGGCGAG ATGCCGCCGA TCTTCGTCAT CGGCTCGGAC GGTCAGCCAG AAATCGTCAA TAGCCGCGTC CACAACAACA TCCTGATCGT GGATCGCCTT TTCGGGGCGG CCGAACTTCG GCTTGGCAGC GGCAATCGCC AGCAAATCGT GCGGATCGTC AGGACTGACG GGAGGCCGAC GACATGA
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Protein sequence | MNDSTILAHG RKAVRASILL AALASATALT GCATAPRPPH ITYDADVPPL PVVPAAVTDE TPRPIHVPPA WSPATGGTAA STPTARVENA NLAARVEPRR EGYYNAIQIY PWSEGALYQV YAAPGQITTI ALEPGESLTG AGPIAAGDTA RWIIGDTESG SGPNRRVHVL VKPTRPDITT NLVVSTDRRV YLIELRSGEN PYMPAVAWAY PTPPASQRQT APAAPIIPAV ASRNYRYGLT GDAPPWRPIS VYDDGRRVYI EFPRGIVQGE MPPIFVIGSD GQPEIVNSRV HNNILIVDRL FGAAELRLGS GNRQQIVRIV RTDGRPTT
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