| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3854 |
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| Symbol | |
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| ID | 4182445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 4155079 |
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| End bp | 4157571 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638069746 |
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| Product | conjugal transfer ATPase TrbE |
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| Protein accession | YP_676386 |
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| Protein GI | 110636178 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0508748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAACC TTGCCGAATA CCGCAATCGG AGCACGCGCC TCGCGGACTA TCTGCCTTGG
GCTGCCCTCG TAGCGCCGGG CGTCGTGCTC AACAAGGACG GCAGCTTCCA GCGCACGGCG
CGCTTCCGCG GACCCGACCT CGACTCGGCT ACGCCGGCCG AGCTGGTCGG CACGACGGCC
CGGCTCAACA ATGCGCTGCG CCGACTCGGC AGCGGGTGGG CCGTCTTCGT CGAGGCCCAG
CGCGTCCAGG CAACGCACTA TCCCGACAGC CAGTTTCCCG ACGCAGCCTC CGCGCTGATC
GACGTCGAGC GGCGCGAGCA GTTCGAAGCC GAAGGCGTCC ATTTCGAAAG CCGCTACTTC
CTGACCTTTC TTTGGATGCC GCCCGCCGAG GAGGCAAGCC GCGCTGAAAG CTGGCTCTAC
GAGGGCAAGG CGCGCACGGG CGTCGATCCC TGGGAATTGC TCGCCGGCTT CGTCGATCGG
ACCGATCGTA TCCTCCAGCT TGTCGAAGGT TTCGTGCCGG AGGTCGACTG GCTCGATGAC
GGCGAGACGC TGACCTATCT GCATTCGACC GTCTCGACCC GGCGTCAGCG GGTGCGCGTG
CCCGAAGCGC CGATGTATCT CGACGCGATT CTGGTCGATG AGCCGCTGGC CGGCGGCCTC
GAACCACGTC TGGGCGAACA TCATCTGCGC ACGCTCACCG TCACCGGATT CCCCACCGCG
ACCTTCCCCG GCATCCTCGA CGAGTTGAAT CGGCTGGCGT TCGAGTATCG CTGGTCCACG
CGGGCAATCC TGCTGGACAA GACGGACGCG ACCAAGCTCC TGACGCGCAT CCGTCGCCAG
TGGTTCGCCA AGCGGAAGTC CGTCGCGGCC ATTGTCAAAG AAGTCATGAC CAATGAGGCA
TCGACGCTGC TCGACAGCGA CGCGGCCAAC AAAGCGTTCG ACGCGGACAT GGCTTTGCAG
GAGCTGGGCA GCGACGACGT GGGCGAAGCC TATGTCACCG CCACTGTTAC GGTTTGGGAT
CGCGATCCCG CAATCGCAGT CGAAAAGCTC CGGCTGGTCG AGAAGATCAT CCAGGCGCGA
GATTTCACGT CGATCCCCGA AACCATCAAC GCGATCGAAG CGTGGCTCGG CTCGTTGCCT
GGGCAGCCTT ACGCCAATGT GCGGCAGCCG CCGGTCTCGA CGCTCAACAT CGCCCACATG
GTGCCACTCT CGGCCGTGTG GGCGGGGCCG GAACGGAACG ATCACCTCGG CGCGCCCCCG
CTGCTTTACG GCAGGACCGA GGGATCGACT CCGTTCCGGT TCTCCCTTCA CGTCGGCGAC
GTAGGCCACA CACTCGTCGT CGGCCCGACC GGCGCCGGCA AGTCCGTGCT GCTGGCGCTG
ATGGCGCTCC AGTTCCGCCG CTACACGAAC AACCAGATCT TCGCCTTCGA TTTCGGCGGC
TCCATCCGCA TCGCAGCGCT CGCGATGGGC GGCGATTGGC ACGACCTGGG CGGCGGGCTC
AGCGACGGCG CAGACGCGAC CGTCTCGCTA CAGCCCCTCG CGCGCATCCA TGATGTTCCC
GAACGTGCTT GGGCAGCGGA CTGGATCGTG TCGATCCTCG GCCGCGAGGG CGTTCAGATC
ACCCCGGAGG TCAAGGAGCA TCTATGGTCG GCGCTGACCT CGCTGGCCTC CGCGCCGGTC
GACGAGCGCA CGATCACCGG ACTTTCGGTG CTGCTGCAAT CGAACGAATT GAAGCGTGCG
CTGCGACCCT ACTGTGTCGG CGGTCCCTGG GGTCGGTTGC TCGACGCCGA GCGCGAGCAT
CTCGGCGAGG GCTCGGTGCA GGCTTTCGAG ACCGAGGGTC TGGTCGGCAC CGGCGCTGCA
TCTGCCGTGC TGACCTACCT CTTCCATCGC ATCGAGGGTC GCCTGGACGG CCGGCCCACG
CTCCTCATTA TCGACGAGGG TTGGCTGGCG CTCGACGATG AGAACTTCGC CGACCAGCTC
CGCGAGTGGC TGAAGACGCT CAGAAAAAAG AACGCTGCCG TGATATTCGC CACGCAGTCG
CTTTCCGACA TTGGCGACTC GGCGATTGCC GCCGCGATCG TCGAGAGCTG CCCGACGCGA
TTGTTCCTTC CCAACGAACG TGCAATCGAG CCGCAAATCC TCGCGATCTA CCGCAAGTTC
GGGCTCAACG ACCGCCAGAT CGAAATCCTC GCGCGGGCGA CGCCCAAACG CGACTACTAC
TGCCAGAGCC GCCGCGGCAA TCGCCTTTTC GAGCTTGGCC TGGGCGACGT TGCGCTCGCG
CTCTGCGCCG CATCCTCCAA GCAGCATCAC GCCCGTGTCG ACCGTGTGCT GGCCACCGCC
GGCCGTGACC GCTTTCTCGA AGCGTGGCTC GGTGACTGCG ACCTTGGCTG GGCGGCCGAC
CTCATTCCCG ACCTTCCCAA CATTGCCGGC AGCGAGATGG CGCCGGCCGA TGTGCCGCCC
CCCAACCAGC GTCCAGAGGA GATCGACCAA TGA
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| Protein sequence | MLNLAEYRNR STRLADYLPW AALVAPGVVL NKDGSFQRTA RFRGPDLDSA TPAELVGTTA
RLNNALRRLG SGWAVFVEAQ RVQATHYPDS QFPDAASALI DVERREQFEA EGVHFESRYF
LTFLWMPPAE EASRAESWLY EGKARTGVDP WELLAGFVDR TDRILQLVEG FVPEVDWLDD
GETLTYLHST VSTRRQRVRV PEAPMYLDAI LVDEPLAGGL EPRLGEHHLR TLTVTGFPTA
TFPGILDELN RLAFEYRWST RAILLDKTDA TKLLTRIRRQ WFAKRKSVAA IVKEVMTNEA
STLLDSDAAN KAFDADMALQ ELGSDDVGEA YVTATVTVWD RDPAIAVEKL RLVEKIIQAR
DFTSIPETIN AIEAWLGSLP GQPYANVRQP PVSTLNIAHM VPLSAVWAGP ERNDHLGAPP
LLYGRTEGST PFRFSLHVGD VGHTLVVGPT GAGKSVLLAL MALQFRRYTN NQIFAFDFGG
SIRIAALAMG GDWHDLGGGL SDGADATVSL QPLARIHDVP ERAWAADWIV SILGREGVQI
TPEVKEHLWS ALTSLASAPV DERTITGLSV LLQSNELKRA LRPYCVGGPW GRLLDAEREH
LGEGSVQAFE TEGLVGTGAA SAVLTYLFHR IEGRLDGRPT LLIIDEGWLA LDDENFADQL
REWLKTLRKK NAAVIFATQS LSDIGDSAIA AAIVESCPTR LFLPNERAIE PQILAIYRKF
GLNDRQIEIL ARATPKRDYY CQSRRGNRLF ELGLGDVALA LCAASSKQHH ARVDRVLATA
GRDRFLEAWL GDCDLGWAAD LIPDLPNIAG SEMAPADVPP PNQRPEEIDQ
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