Gene Meso_3743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3743 
Symbol 
ID4180693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp4045218 
End bp4046330 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content60% 
IMG OID638069636 
Productspermidine/putrescine ABC transporter ATPase subunit 
Protein accessionYP_676276 
Protein GI110636068 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGAGAGA CCGCGTCCGA TATAGATGGT GCCGGCCTAA AGCTTCGCGG GATAAGCAAA 
TCCTTCGGAA ATCTCCAGGC ATTGAGCAGA ATGGACCTGT CGGTGCCGAG GGGCGAGCTG
ATGGCCCTTC TGGGACCGTC AGGCTGTGGC AAGTCCACCA CATTGAGGAT CATTGCTGGA
TTCGAGCAGC CAGATACCGG AAAGGTGCTG ATCGCCGGCA AAGATGTAGT GCATCTGCCG
CCGAACCGCC GCGGTTTAGG CATGGTGTTC CAAGACTACA GCCTATTCCC CCATATGACC
GTGGCCGAGA ATGTGGGCTT CGGACTGAAA ATTGCCGGCC TTGCGCGTGC TGAGATAGCG
AAGAGGGTAC GCGAAGCCTT GAAACTCGTA CAGTTGAGCG GTCGCGACGA CTACTTCCCG
ACGCAGCTCT CCGGCGGCCA GCAGCAGCGG GCGGCGCTTG CCCGTTCGCT GATCATGCGG
CCTTCACTCC TGTTGCTGGA CGAGCCTTTA GGCGCACTCG ACAAAAATCT GCGTGAGAAT
ATGCAGTTCG AATTGCGGCG GATCCAGCGG ACGATGGACA TCACCACGGT GATGGTGACG
CATGACCAGG AGGAGGCGCT GACCCTTGCA GACCGGATTG CGGTGATGGT CGACGGTCGC
GTTTTGCAGG TCGGCACGCC GCTTGAGGTT TATGAGAGTC CCGCAAATCG CGTCGTCGCC
GAGTTTCTGG GTACCGCCAA TATTTTCGAA GGCGTCGCCG ACCGCCACAC CATACGAGTT
GCTTTGGGCG ATCGTACTGA GGTGCTCGCG GCCCAGCCCG AACTGCGTGA CGGCGCTGTA
CTCCTTGGCA TCCGTCCTGA GAAGATGTGG ATATCGGGAG AGCGAAACAG CCGTGGCAAC
GCGGTGGCCG GAACAGTTAT CGGCCACGTT TTTCGCGGCA CCGCGCATGT TTACGAGGTG
GAGGTCGGCC CCAATCTCGC ACCGGTCCAG GTTCTGGAGC AGGCGAACAG CCGCCATGAT
ACGCGCGTCT ATTCGCTGGG AACTTCAGTT TGGATCGGTT GGCGGCCCGA GGATGCCTTC
GTGTTCCCTG CAGAGCGGGA GGGGCGTGCA TGA
 
Protein sequence
MRETASDIDG AGLKLRGISK SFGNLQALSR MDLSVPRGEL MALLGPSGCG KSTTLRIIAG 
FEQPDTGKVL IAGKDVVHLP PNRRGLGMVF QDYSLFPHMT VAENVGFGLK IAGLARAEIA
KRVREALKLV QLSGRDDYFP TQLSGGQQQR AALARSLIMR PSLLLLDEPL GALDKNLREN
MQFELRRIQR TMDITTVMVT HDQEEALTLA DRIAVMVDGR VLQVGTPLEV YESPANRVVA
EFLGTANIFE GVADRHTIRV ALGDRTEVLA AQPELRDGAV LLGIRPEKMW ISGERNSRGN
AVAGTVIGHV FRGTAHVYEV EVGPNLAPVQ VLEQANSRHD TRVYSLGTSV WIGWRPEDAF
VFPAEREGRA