Gene Meso_3620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3620 
Symbol 
ID4181217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3905864 
End bp3907030 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content63% 
IMG OID638069514 
Productmandelate racemase/muconate lactonizing-like protein 
Protein accessionYP_676154 
Protein GI110635946 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.265369 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCG TTCGCATCCT GGAGAAAGAC CTGCCGATAA CGTCTCCAGG CGCCAATGCG 
GTGGTCGACT TCGCCGGGCT AACGACGTCG GCGGTCGCGA TCGTGACCGA TGCGTTCCGG
GACGGAAAGC CGCTTGTCGG ATACGGCTTC GGATCGATTG GCCGGTGGTC GGTCGGCGGC
ATGCTGCGCG AGCGCTTCAT CCCCCGGATC TTGGCAGTCG AACCGGCGAG CCTTCAGGAC
GAGACGGGGA ACATCGATCC GTTTGCCTGC TGGAACGCCG CGATGCGCAA CGAAAAACCC
GGCGGCCACG GCGACCGCGC GACCGCCTTG GGAGCGCTCG ACATGGCCTT GTGGGATCTG
CGGGCGAAGG CGGACGGCGT TCCGCTTTAC CGCCTCCTGG CGGACCGATA CCGTGACGGG
CAGGCCGACG AGGACGTCGC GGTCTATGCG GCCGGGGGAT ACTACCAACC CGGCAGCAAT
TATCGTTCGC TCCAAGACGA ACTCAAGGGC TATATCGATC GCGGCTACAA CGAGGTGAAG
ATCAAGATCG GCGGCGCACC GCTCGCCGAG GACATGAGGC GGATCGAAGC CGCCATCGCG
GTTTTAGGCG ACGGGGCGCG GCTTGCCGTT GATGCCAACG GACGCTTCGA CCTGGAAACC
GCCCTTGCCT ATGGCCGCGC CATGAGCGAC TACGGTCTTC GCTGGTACGA GGAGCCAGGC
GACCCGCTCG ATTTCCGGCT AATGGCAGTG CTCGCCGAAC ATTACGACGG GCCGCTCGCC
ACGGGCGAGA ACCTCTTTTC GTCGCAGGAC GCGCGCAATC TCCTGCGCTA TGGTGGGATG
CGGGCCGAGC GCGATTTCGT GCAATTCGAC TGCGGCCTCG CCTATGGCCT GCCGGACTAC
CTCAAAGTGC TGGACATCAT GCGTCGGCAC GGCTGGTCGC CAAGACGCCT GCATCCCCAT
GGCGGACACC AAATGTCGCT TCACCTTGCA GCAGGCCTCG GCCTTGGCGG CAACGAAAGC
TATCCGGGGG TCTTCCAGCC CCTCGGCGGC TTTGCAGACT GTTCGAAGGT GGAAAACGGA
CGAGTTCGAT TGCCCGATGC GCCAGGCGTC GGGCTCGAAC TCAAATCCGA GTTGAAGACA
TGGCTTGACG AAGCGTTCGA AATTTAG
 
Protein sequence
MKIVRILEKD LPITSPGANA VVDFAGLTTS AVAIVTDAFR DGKPLVGYGF GSIGRWSVGG 
MLRERFIPRI LAVEPASLQD ETGNIDPFAC WNAAMRNEKP GGHGDRATAL GALDMALWDL
RAKADGVPLY RLLADRYRDG QADEDVAVYA AGGYYQPGSN YRSLQDELKG YIDRGYNEVK
IKIGGAPLAE DMRRIEAAIA VLGDGARLAV DANGRFDLET ALAYGRAMSD YGLRWYEEPG
DPLDFRLMAV LAEHYDGPLA TGENLFSSQD ARNLLRYGGM RAERDFVQFD CGLAYGLPDY
LKVLDIMRRH GWSPRRLHPH GGHQMSLHLA AGLGLGGNES YPGVFQPLGG FADCSKVENG
RVRLPDAPGV GLELKSELKT WLDEAFEI