Gene Meso_3552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3552 
Symbol 
ID4181800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand- 
Start bp3826285 
End bp3826995 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content63% 
IMG OID638069446 
ProductGntR family transcriptional regulator 
Protein accessionYP_676087 
Protein GI110635879 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.430063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCCGCA AACCCGTTTT GGCGCGCGTC GTGCTCGTCG ACCAAGTCAC CGCCGTTCTG 
ATGGAACGCA TTCTCGACCG CGACTACACC CCGGGCGAGA AGCTTAACAT CGATGCGCTC 
TCGCGTGAGT TCGAGGTGAG TTCCTCTCCC ATTCGCGAGG CGTTGACGCG GCTGTCCACG 
CTGGGCCTGG TCGCATTCGC CTCCTTCACC GGATTTTCGG TCGCGCCTGA GCCATCGCGC 
GAGTGGTTCG AGCAGTTGCG CGACTTCCGC ATCCTTAACG AGGGGTGGGC GGCTCGGCGT 
CTGGCGCGCA GCCGCGAACC CGCGGCGATC GCGCGAATGC GTGAGAGCAT CGAGGCGATG 
GAGGCCAATC CGCCGCGCGG GCAGGACCGG GACTATGTCG GCATTAGCCG TGCCGACGAG 
AACTTCCACA ACGCCATGCT GGAGGCCGCC GGCAACGAGA TTTTGTCCCA GGCGGTAAAG 
GGACTGCATC CTCATCTGCA TCATGCGCGG CTGTTCAGCC GCATCCCCCA CGACATTGCG 
CCGATGCTCG ACGAGCACCG CGCCATCTAC GACGCGATCA TCCGGGGCGA CGAAGATGGG 
GCTCAAGCCG CGGTCGAAGT GCATCTTCAG ATGTCATGGC GTCGCTACGG CGGCTGGCAT 
TCGGACCTGC CAGGAAAATC GCAAGAAGAA CTTTCGGGCG TGAAAGGTTA G
 
Protein sequence
MIRKPVLARV VLVDQVTAVL MERILDRDYT PGEKLNIDAL SREFEVSSSP IREALTRLST 
LGLVAFASFT GFSVAPEPSR EWFEQLRDFR ILNEGWAARR LARSREPAAI ARMRESIEAM 
EANPPRGQDR DYVGISRADE NFHNAMLEAA GNEILSQAVK GLHPHLHHAR LFSRIPHDIA 
PMLDEHRAIY DAIIRGDEDG AQAAVEVHLQ MSWRRYGGWH SDLPGKSQEE LSGVKG