| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3391 |
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| Symbol | dapF |
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| ID | 4183128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 3665498 |
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| End bp | 3666379 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638069285 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_675927 |
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| Protein GI | 110635719 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGAAC TGGCGCAATT CGCGAAGATG AACGGGCTTG GCAATGCCAT CATCGTTGCC
GATATGCGCG GCAGGGCCGA TCGCGTGCGC CCGGAGGCTG CGCAGCGCCT TGCCAGCGAT
CCCGCCACTC ATTTCGATCA GATCATGGCG ATCCATGATC CGCGCCTTGA GGGCACGGAA
AATTACATCG AGATCATCAA TTCCGACGGC AGCGTGGCGC AAGCCTGCGG CAATGGCATG
CGCTGCGTCG TGCAGAGGCT CGCTGCGGAA ACCGGCCGAC CAAGCTTTAC CTTTGAAACG
ATTGCTGGCG TGCTGAGTGC AGAAGAGCAC GCGAACGGCC TGATATCCGT CGATATGGGT
AAGCCTCGTT TCGGCTGGCA GGATATTCCT CTTGCAGAAG AATTCCACGA CACGCGCAAG
ATTGAGCTGC AAGTCGGCCC CATCGACAAA CCGGTGCTGC ACTCGCCGTC CGTAGCCTCG
ATGGGCAATC CACACGCGAT CTTCTGGGTC GAGGACGATC CATATTCCTA TGATCTGGAA
CGCTTCGGGC CGATGCTCGA AAACCACCCC ATCTTTCCCG AGCGAGCCAA TATCACCATT
GCCCGCGTGG ACTCGCCGGA GGAGCTGACC ATGCGCACAT GGGAGCGGGG CGCAGGCCTG
ACGCTCGCCT GCGGCTCGGC CGCTTGCGCG GCCGCCGTTT CGGCTGCGCG CACCGGGCGC
ACCGGGCGGG GCGTCAAGGT GAACCTGCCT GGCGGTTCGC TCGAAATACT CTGGCGCGAC
GATGACCATG TAATCATGAC CGGACCGGCG GAATGGGAGT TCTCTGGCCG TTTTGATCCC
GCTACCGGTG CTTGGGAGCG CGAGACGGAA GGGGCCGCCT GA
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| Protein sequence | MAELAQFAKM NGLGNAIIVA DMRGRADRVR PEAAQRLASD PATHFDQIMA IHDPRLEGTE
NYIEIINSDG SVAQACGNGM RCVVQRLAAE TGRPSFTFET IAGVLSAEEH ANGLISVDMG
KPRFGWQDIP LAEEFHDTRK IELQVGPIDK PVLHSPSVAS MGNPHAIFWV EDDPYSYDLE
RFGPMLENHP IFPERANITI ARVDSPEELT MRTWERGAGL TLACGSAACA AAVSAARTGR
TGRGVKVNLP GGSLEILWRD DDHVIMTGPA EWEFSGRFDP ATGAWERETE GAA
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