| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3183 |
|---|
| Symbol | |
|---|
| ID | 4182273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 3453636 |
|---|
| End bp | 3454649 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638069076 |
|---|
| Product | Sel1 repeat-containing protein |
|---|
| Protein accession | YP_675720 |
|---|
| Protein GI | 110635512 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.440754 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGTC TCCTGGCCGT TCTCTGCGCG CTGGTGATTT GGTCAGGTCC CGCGCCGGCC
TGGGCGCAAA CGACACCCGG TGCACCCGCG GCCAGTCCCG CCGAGCAAAA GGGAGCCCGG
CCTTCAGCGC CAGGCAATAG CGAAGGAAGC AGGGAGCAAC CTTCCGCTCC CGCGCTCGAC
CCATCCCGCT TCGGCAAGGT TCTCGACGAG GCGTTCGGCG CGTATCAGCG CGGGCACTAT
CTCACGGCAC TGGAGCTTGC CCGACCGCGC GCCGAAGCAG GCAATGCGGC GGCGCAGACC
CTCATTGCCG AAATCCATGC GCGGGGGCTC GGCGTGCCGC GCAATGGGAA GGAAGCGGCC
AAGTGGTACG GCAGGGCCGC CGAGCAGGGC AATCCCGAGG CCCAGCTTCA GTTCGGATTG
ATGCTGCTCG ATGGTGAATT CATCGAGCGC GACTTCGACA AGGCCTACGA GCTCATGCGC
AGGGCTGCGG AGGCGGGCAA GCCTCTCGCC CAATTCAACC TTGCGCAGAT GCTGATCGAG
AGCGGCGCGA AAGAGGCGGA TGCGGTGATC TGGTACGAGC GGGCCGCCGA GGCGGGCCTG
CCGGACGCGC AATACGCGAT GGCGCAGATC CTCGCCAACG GTTTTGCGGG AAAACAGGAA
GACGAGGAAA AGGCCCGCCA GTGGCTGGAG AAGGCTGCGC GGCAAAATTT CGAGACCGCC
CAGCTTGATC TCGGCGCATG GCTGATTGAG GGGCGGGGCG GCACAAGAAA CATGGAGGAA
GGTTTCCGTT GGCTAAAGAG AGCGGCTGAA AGCGGCAATG CGGCAGCCCA GAACCGTCTT
GCGAAGGCTT ATATGGCCGG CCTGGGAACA GAGCCGGACT CTATCCTCGC CGCATCCTGG
TACATGACGG CGCGCAGGGC GGGCCTCACG GACCTGGATA TGGAAGATTT CCTGGCCGGC
CTGACGGACG AGCAGATCAA AAAGGCCACG GAGCGCTCGC AAGAGTTGAG GTAG
|
|---|
| Protein sequence | MRRLLAVLCA LVIWSGPAPA WAQTTPGAPA ASPAEQKGAR PSAPGNSEGS REQPSAPALD
PSRFGKVLDE AFGAYQRGHY LTALELARPR AEAGNAAAQT LIAEIHARGL GVPRNGKEAA
KWYGRAAEQG NPEAQLQFGL MLLDGEFIER DFDKAYELMR RAAEAGKPLA QFNLAQMLIE
SGAKEADAVI WYERAAEAGL PDAQYAMAQI LANGFAGKQE DEEKARQWLE KAARQNFETA
QLDLGAWLIE GRGGTRNMEE GFRWLKRAAE SGNAAAQNRL AKAYMAGLGT EPDSILAASW
YMTARRAGLT DLDMEDFLAG LTDEQIKKAT ERSQELR
|
|---|
| |