| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3176 |
|---|
| Symbol | ruvB |
|---|
| ID | 4182266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 3448562 |
|---|
| End bp | 3449599 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638069069 |
|---|
| Product | Holliday junction DNA helicase RuvB |
|---|
| Protein accession | YP_675713 |
|---|
| Protein GI | 110635505 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
|---|
| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGC CGGACCGCAT CGTTTCTGCT GTCCAGCGCG GCGAGGATAT CGACACGACG
ATGCGTCCGC AGTCGCTGGA CGAATTTGTC GGCCAGAAGA CGGCACGCGC CAATCTCAAA
GTGTTTATTG AGGCGGCGCG CTCGCGGGGC GAAGCGCTGG ATCACGTGCT GTTCGTCGGC
CCACCGGGCC TCGGCAAGAC CACGCTTGCC CAGATCATGG CGCGAGAGCT CGGCGTCAAT
TTCCGGTCCA CCTCCGGCCC GGTTATCGCC AAGGCAGGTG ACCTTGCGGC GCTTCTCACC
AATCTTGAGG AGCGCGACGT GCTCTTCATC GACGAGATCC ACCGGCTCAA TCCTGCCGTG
GAAGAAATCC TCTATCCCGC GATGGAGGAC TACCAGCTCG ATCTCATCAT AGGCGAGGGC
CCCGCGGCGC GCTCGGTCAA GATCGACCTT GCCAAATTCA CGCTCGTTGC CGCGACCACC
CGCCTTGGGC TCTTGACCAC GCCGCTGCGT GACCGGTTCG GCATCCCGAT CAGGCTCGAA
TTCTACACGG TCGACGAATT GCAGGCGATC GTCACGCGAG GCGCACGCAT TATGGGCATG
CCGCTTGCCG AAGACGGCGC GGAGGAGATC GCACGCCGCG CCCGAGGAAC GCCCCGAATC
GCCGGCCGCC TTCTGCGCCG GGTGCGCGAT TTCGCCTATG TGGCGGGCGC GGAAAACGTG
ACGCGGCAGA TCGCCGACGC GGCGCTTTCA AGGCTTGAGG TGGATGCGCT CGGCCTTGAT
CAGCTTGACC GGCGCTATCT CCATATGATC GTGGAGAATT TCGGTGGCGG CCCTGTGGGG
ATCGAGACAA TCGCGGCTGC GCTTTCCGAG CCGCGCGACG CCATCGAAGA CATTATCGAG
CCCTATCTCA TCCAGCAGGG CTTCATTCAG CGCACACCGC GCGGCCGGGT GCTTGCGGCC
AAGGCCTGGA GGCATCTCGG GCTGAACCCG CCGAAGGAGC TTGCGCAGTC GCAGATCAAT
TTATTCGAGG AGGAGTGA
|
|---|
| Protein sequence | MSEPDRIVSA VQRGEDIDTT MRPQSLDEFV GQKTARANLK VFIEAARSRG EALDHVLFVG
PPGLGKTTLA QIMARELGVN FRSTSGPVIA KAGDLAALLT NLEERDVLFI DEIHRLNPAV
EEILYPAMED YQLDLIIGEG PAARSVKIDL AKFTLVAATT RLGLLTTPLR DRFGIPIRLE
FYTVDELQAI VTRGARIMGM PLAEDGAEEI ARRARGTPRI AGRLLRRVRD FAYVAGAENV
TRQIADAALS RLEVDALGLD QLDRRYLHMI VENFGGGPVG IETIAAALSE PRDAIEDIIE
PYLIQQGFIQ RTPRGRVLAA KAWRHLGLNP PKELAQSQIN LFEEE
|
|---|
| |