| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3150 |
|---|
| Symbol | |
|---|
| ID | 4183103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 3419640 |
|---|
| End bp | 3420428 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 638069043 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_675687 |
|---|
| Protein GI | 110635479 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCA GTAAAGACTA TCCATTGACG ATACGGCCGG TGGTGACGTT GTCAGATGAG
TACCAGGCCG GGTATATCGA TCCCTTCCAT TCGCATGAGC GGGCGCAGCT CAGCTTTTCG
CTATCCGGCG TGCAGTCACT GATTACCGAA ACGGCGACCT ATGTCCTGCC GCCGAACCGC
GCCATTTGGA TTCCGCCCGG CGTACGCCAC AAGACCCACT GTCGCGAGAA CGTGCGGTTC
TACGCCGTTT ATATAGACCC GACGCTGGAC AACCTCCCAA AGGAATGCCG CGTCTTCGAA
GTGTCGGATC TGGTGCGGGC GCTAATTGGC GAGATCATGA CGTTCAATTT CGCCTACAAT
GAATTCGGCC GGGAGGGACA GATCGTCCGG CTTCTGCTTG ATGAAATCCC GCGCATGCCA
ACAGTGGACA TCCAGATTCC GATGCCGACC GACAGCCGGA TTCTGCGTGT ATGCAACATG
CTTATCGAGC AGCCGGGCGA TGCTCATGAC ATCGATTACT GGGCTTCCGT CGCCAATATG
GGCCGGCGCA CCTTTACCCG TGTTTTCAAG AAGCAGACGG GGATGGCGCT ATCGACCTGG
CGGCTGCAAG TGAGGTTGAT GCATGCGTTA TCGCTGCTGC ACGCCGGCCA TTCCATCACC
TCCGTCGCCT ATGGCATCGG CTATGAAAGC ATCTCGGCCT TCACTTCAGT CTTTCACCGG
TCATTCGGTT TTCCGCCCAG CCATTACCGC ACCGGGAAAG TGACAAAAAT GACTGCCGAA
AAGGCCTAA
|
|---|
| Protein sequence | MKRSKDYPLT IRPVVTLSDE YQAGYIDPFH SHERAQLSFS LSGVQSLITE TATYVLPPNR
AIWIPPGVRH KTHCRENVRF YAVYIDPTLD NLPKECRVFE VSDLVRALIG EIMTFNFAYN
EFGREGQIVR LLLDEIPRMP TVDIQIPMPT DSRILRVCNM LIEQPGDAHD IDYWASVANM
GRRTFTRVFK KQTGMALSTW RLQVRLMHAL SLLHAGHSIT SVAYGIGYES ISAFTSVFHR
SFGFPPSHYR TGKVTKMTAE KA
|
|---|
| |