Gene Meso_3025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3025 
Symbol 
ID4181500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand- 
Start bp3298497 
End bp3299141 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content65% 
IMG OID638068916 
ProductHhH-GPD 
Protein accessionYP_675562 
Protein GI110635354 
COG category[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.559258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCGAA TCGAAACGGC AGCCGATATC AGGCGCGGAC TGGACGCCTT GGTTCTGCTC 
GACCGAAGGC TTGGGCCTGT GCGAGCTGTC GCGGGCGCCG TGCCGCTGCG GCGCGGCCCC 
CCAGGCTTCC ATAGCCTTGC CTCGGTCATT GTCTCCCAGC AGGTCTCGCG AGCAAGCGCC 
GACGCGATTT TCGCGAGGCT TTCCCAATTG GTAAAGCCGT TGACGCCCGA CGGATTTCTC 
GCCGCCGGCG AGAGCGTGAT GGTGAAAGCG GGACTATCGC GGGCGAAGCA ACGCACCTTG 
ACTGCGCTCT CTGCGGCGCT GCGGGACAAG GCGCTCGACC TTGACGATCT CGGTAACCTT 
CCGCCGGCAG ATGCCATGGA GGCGTTGACA GTCATTCCAG GCATCGGTCC GTGGACCGCA 
CAGGTTTACC TGCTGGTTGC TGCCGGCCAT CCGGACATCT TCCCCGCGGG CGACATTGCC 
TTGCAGGCGG CGGTTGGCCA TGCGCTGGCG CTCGATGCGC GCCCAAAGGC GAATCAGCTC 
GCCCTCATAG CCGAACCGTG GAGCCCGTGG CGCTCTGTCG CAGCCCGTCT TTTTTGGGCG 
TATTATCGTG AGATCCGTGG CGCGGAAGCC GCTCCGGCGG CCTGA
 
Protein sequence
MERIETAADI RRGLDALVLL DRRLGPVRAV AGAVPLRRGP PGFHSLASVI VSQQVSRASA 
DAIFARLSQL VKPLTPDGFL AAGESVMVKA GLSRAKQRTL TALSAALRDK ALDLDDLGNL 
PPADAMEALT VIPGIGPWTA QVYLLVAAGH PDIFPAGDIA LQAAVGHALA LDARPKANQL 
ALIAEPWSPW RSVAARLFWA YYREIRGAEA APAA