| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_2876 |
|---|
| Symbol | |
|---|
| ID | 4182688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 3129239 |
|---|
| End bp | 3130012 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638068764 |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_675417 |
|---|
| Protein GI | 110635209 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGGGG GGCTCGGAAA AGACACGGGC GAACTGATCG ATCGCGCCGT CAATCGCCTT
CTTTGGAAGA TGGGAAGCCG GCGCCGAGAG GTGGTCACGG ACACGCCACT CGTCACTTTC
ACCTTCGATG ATGTTCCTGA CACTGCCCTT TCGAATGGCG CGGGCATTCT GGAGCGACAT
GACGCCCGCG GCACATTCTA CATTGCCGGC GGCCTCGGCT CCCAGGTGGA GGCGGATCGC
ACATTGATCT CACGCGAGGG CTGCCGCGAA CTTTCTTTGC GCGGACATGA AATCGGCTGC
CATACATTCG CCCACCGCAA GCTCCGCAAT CTCGGCGGCG CTCTTCGGGC GGATTTGACG
AGGAACGAGG CCTATCTTCG GGAGGCTGGC GTTGAGCAGC CGATCCGCAA CTTTGCCTAT
CCGTTCAATG CCGCGTGGCC TCCCGCAAGA CGGGCGCTCC ACGCCCGCTA TGCGACCTGC
AGAGGCGCAG GCGAGGCCAT CAATCGCGGC AGCACCGATC ATCTGATGCT GAAGGGAGTG
GAAATCCGTC AGCCCGAGAC CCATGCGCGC TCACTGACCC GCTGGATTGA CGATGTGGCT
GCGGAACCGG GATGGCTGGT CTTCTTCACG CACGATATCG CTGAAGTCCC GACACCTTTC
GGCTGCACGC CGGGAACCTT TGAGCACCTG GTTTCCTATG CCGTGGCAAA AGGGTGCCGG
ATCGTAACGG TCGGTGAGGC CGTTTCGCTG CTGGGCTGGG AGAATAAGCG GTGA
|
|---|
| Protein sequence | MMGGLGKDTG ELIDRAVNRL LWKMGSRRRE VVTDTPLVTF TFDDVPDTAL SNGAGILERH
DARGTFYIAG GLGSQVEADR TLISREGCRE LSLRGHEIGC HTFAHRKLRN LGGALRADLT
RNEAYLREAG VEQPIRNFAY PFNAAWPPAR RALHARYATC RGAGEAINRG STDHLMLKGV
EIRQPETHAR SLTRWIDDVA AEPGWLVFFT HDIAEVPTPF GCTPGTFEHL VSYAVAKGCR
IVTVGEAVSL LGWENKR
|
|---|
| |