| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_2587 |
|---|
| Symbol | |
|---|
| ID | 4181863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 2787662 |
|---|
| End bp | 2789188 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638068482 |
|---|
| Product | polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_675136 |
|---|
| Protein GI | 110634928 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGGTA AGACGGAGCG GCTGGAAGGC GCGCGAGCGC CGGGAAGACG GTTTTCACTC
CGTATTCCCT CGATCGTCGG CAGCGGCCTT TGGGCGCTGT CGGCAAAGCT GGTGACCCAG
GTTTGCCAGC TTGCGGCCTT CATCATTGCA GCCCATGTGC TTACTCCCGC GCAATTCGGC
CTTTTTGCCT TCTGCTCCGC CATCGCAATC CTCCTCGTTA TGCTCGCAGA AGGTGGATGG
GCGGAATTCG TCATGAAGTC TTCCGAAGGC GAAGCTCATC TCGACCAGAT CGCTGGCATG
TCGCTCGCAA GCGGTCTCTT TTTCATGATT GTCGGTCTTC TCACCGCCGG CGTTCTGCAT
GGCGCGTTCG GCAAAAGCTG GGAGGCGTTC CTGCTGGCGC TCTTTTCGTG CTGGATCCTG
CCGGCCGCGC TCACCACCGT CTATGACGGC GTTCTTGTGC AGCAGGGAAA ACTGAAACGG
CAGGCGATGA TCCGGATCAC CGCCGAGCTG GCCGGCCTTG CCCTAATCGT GTTCGGCCTC
AGGGAAGGCT GGAATGTCTT CGCCCTTGCG GCCGGGCGGC TCGCAATGCA GATGGTTCTC
CTCTCAGGTT CCGTTGCGGC GATTGGGTTC GTGGGGCTTG CCAGGCCATC CCGGACAGTT
TTGCGCGAGG TCCTGCATTT CTCTCAGCAG ATTATCTTCA ATCGTCTGAT CGTCTTCTTC
CGCTCCTATT CGGGAACGCT TGCCGTCGGC GGTTTTCTCG GCCTTACGGA GGCTGGCTAT
TATCGGGCCG CGGAGCGCAT AGTAGCTGCC TTTTCGGAAC TTGTCGGCGA ACCGGCACGG
TTGCTCGGCT GGGTGCTCTT CCGTCGCGCC AAGGAACGGC AAGAAAAGGC GGCGGACCAC
GAGGACCTCG TTCGAAACGC CGGCGCGAGT TTCTTTCCTG TCCTCATCGC GGTTGCTGCG
CCGGTTTATC TTGGGCTGGC GGTGGTATCG GAAAGCTTCG TGGAAGTGGC TCTCGGGGAG
GCATGGAAAC CGGCTGCGCT GCTGGTTGGT GTGCTCGCGG CAAAACAGCT GCTGCTTGTC
ACCAGTTATC CGACGGAGCC CTTGCTGGCG GTCCGAGGCA AACTCAAAGC TCTAGCACCG
ATATCGCTTT TCAATGCGCT GGTCTCAGTG GGACTCATAA TCCTGCTCTC GCCTTTTGGC
GTGGTTGCGG TGGCTCTCGG GCAGTGCGTG GCCGCAGCCA TCGCGCTGGC CACCTCCATT
TGGGTGCAGC AGCGCCACGG GGGGCTGAAT TGGTGGGAGA TCGCAAGGAA CAGCGCGCTC
CTGCTCTTTG CGCTCGGAGC AATGCTCGTC GCCATCCTCT ATCTTGGCCG GGTCACCAGT
TTCTTCGAGT TGCGGCCTAC ATTCGTCTTC CTCCTGCAGG TGGGGGTGGG TGCGATCACC
TATCTCGCAG CGGTTTTCGC CCTCTGGAGG TTCGCGGGCT TGGCATGGCT GCATTGGCCG
ACGAGGAGCA TCGATGATCC GATCTAA
|
|---|
| Protein sequence | MSGKTERLEG ARAPGRRFSL RIPSIVGSGL WALSAKLVTQ VCQLAAFIIA AHVLTPAQFG
LFAFCSAIAI LLVMLAEGGW AEFVMKSSEG EAHLDQIAGM SLASGLFFMI VGLLTAGVLH
GAFGKSWEAF LLALFSCWIL PAALTTVYDG VLVQQGKLKR QAMIRITAEL AGLALIVFGL
REGWNVFALA AGRLAMQMVL LSGSVAAIGF VGLARPSRTV LREVLHFSQQ IIFNRLIVFF
RSYSGTLAVG GFLGLTEAGY YRAAERIVAA FSELVGEPAR LLGWVLFRRA KERQEKAADH
EDLVRNAGAS FFPVLIAVAA PVYLGLAVVS ESFVEVALGE AWKPAALLVG VLAAKQLLLV
TSYPTEPLLA VRGKLKALAP ISLFNALVSV GLIILLSPFG VVAVALGQCV AAAIALATSI
WVQQRHGGLN WWEIARNSAL LLFALGAMLV AILYLGRVTS FFELRPTFVF LLQVGVGAIT
YLAAVFALWR FAGLAWLHWP TRSIDDPI
|
|---|
| |