| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_2421 |
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| Symbol | |
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| ID | 4182205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 2593989 |
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| End bp | 2595770 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638068310 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_674970 |
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| Protein GI | 110634762 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase
[TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGAGG GTATGGGCGC GATCGTCCAC GGAAACGGCG TGGCATTCCG CGTTTGGGCT
CCTCATGCCG ACGCGGTGTC GGTCGTCGGC ACTTTCAACG ACTGGTCGGA CGAGGCCGCG
CCGATGACCG CCGAAGATGG CGGGTTCTGG TACGCGGACC TGCCTTCCGC AAAGCCCGGC
GACGAATACC GGTTCCTAAT CCGTAACGGC GAAAAACGCC TGTCGCGCAT TGACCCTTAT
GCCCGCGCTG TGACGAATTC GGTCGGCAAC GGCATCATCG TCGAGCAGCA GGACGACTGG
CATGAGGCCG AATTCGAAAC ACCGCCATGG AACGAGTTGG TCATCTACGA GATGCACATC
GGCACCTTCC ATCGGCCGCA AGACAATGAG CTCGGTACGT TCGACGATGC CACCGAAAGG
CTTGCCCATC TGAAGCGCCT TGGGATCAAT GCTGTGCAGA TTATGCCAGC GATGGAGTTC
GCCGGCGATA TCTCCTGGGG ATACAACCCG GCGCATATCT TTGCCATTGA AAGCTCCTAT
GGCGGGCCGG CTGCCTTCAA GGCCTTTATC AACGCGGCGC ATAAGCAGGG GATCGCTGTC
ATCCTCGACG TGGTCTACAA CCATTTCGGG CCGAGTGATC TCGATCTCTG GCAGTTCGAC
GGCTGGAGCG AAGACGACAA GGGCGGCATT TATTTTTACA ACGACTGGCG CAGCGATACT
CCATGGGGCG ATACGCGTCC CGTTTACGGC CGCGGTGAAG TCCGCCAGTT CATCCGAGAC
AATGCCCTTT TCTGGCTCGA AGAGTACCAT CTCGACGGTC TGCGTTTCGA CATGACGCTC
TACATTCGCA ATGTGCGCGG CGACGAAGGG GATGAGGGCG ATGCAATCCC CGAGGGCTGG
AGCCTGTTGC AGTGGGTCAA CAGCGAAATC CGCGAGCGCC TTCCCGGCCG CATTACCATC
GCCGAGGACC TGCGCAACAA GGCGGAAATC ACAGGCGCAG TCGATGAAGG CGGCGCAGGG
TTCGGCGCGC AATGGGATTC TGAGTTCGTG CACCCGATCC GCGAGACGCT GATTGCGCCT
GATGATGAGT CCCGGCACAT GGGAACCGTC GCCCATGCGC TCGGCCATTC CTATAATGGG
GATCCTTTCC AGCGGGTCGT CTATACCGAA TCCCATGACG AAGTGGCCAA TGGAAAGGCT
CGCATCCCGC ATGAGATCGC GCCGGGCGAC CCTTCGCATT GGGCGGCGCA AAAGCGCTCA
ACGCTGGGTG CCGCGCTCAT GCTTACGGCC CCCGGCATTC CGATGCTGTT CCAGGGCCAG
GAGTTTCTGC AAGGCGAATG GTTCCAGGAT ACGGTTCCTC TGGACTGGGA TCAGAGCGAG
GAATTCAAGG GCATCGTCCG CCTCTACCGC GATCTCATTC GCCTGCGCCG AAATCAAATG
TCGGTCACGT CCGGCCTGCT TGGCCGAAAT ACCCGAATCT TCAGGGTCGA CGAGGAAAAG
AAGCTTATCG CCTTTCACCG GTGGGTCGAA GGCGGGCCGC GGGACGATGT CGTCGTCGTC
GCAAATTTCA GCCATCAGGC ATATGCATCC TATCGCATGG GCTTTCCAAG GCAGGGCCTT
TGGAACCTCC GTCTCAACAC GGATTGGAGC GGCTACAGCC CGGATTTCGG CAGTTTCGAA
AGCCACGATG TGGTTGCCGA AGCCGTGGAA TGCGATGGGC TCTCCTGGTC TGGAGAGGTG
GCGATAGGTC CCTACACCGC GCTTGTGTTC TCACAAGACT GA
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| Protein sequence | MQEGMGAIVH GNGVAFRVWA PHADAVSVVG TFNDWSDEAA PMTAEDGGFW YADLPSAKPG
DEYRFLIRNG EKRLSRIDPY ARAVTNSVGN GIIVEQQDDW HEAEFETPPW NELVIYEMHI
GTFHRPQDNE LGTFDDATER LAHLKRLGIN AVQIMPAMEF AGDISWGYNP AHIFAIESSY
GGPAAFKAFI NAAHKQGIAV ILDVVYNHFG PSDLDLWQFD GWSEDDKGGI YFYNDWRSDT
PWGDTRPVYG RGEVRQFIRD NALFWLEEYH LDGLRFDMTL YIRNVRGDEG DEGDAIPEGW
SLLQWVNSEI RERLPGRITI AEDLRNKAEI TGAVDEGGAG FGAQWDSEFV HPIRETLIAP
DDESRHMGTV AHALGHSYNG DPFQRVVYTE SHDEVANGKA RIPHEIAPGD PSHWAAQKRS
TLGAALMLTA PGIPMLFQGQ EFLQGEWFQD TVPLDWDQSE EFKGIVRLYR DLIRLRRNQM
SVTSGLLGRN TRIFRVDEEK KLIAFHRWVE GGPRDDVVVV ANFSHQAYAS YRMGFPRQGL
WNLRLNTDWS GYSPDFGSFE SHDVVAEAVE CDGLSWSGEV AIGPYTALVF SQD
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