| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_2318 |
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| Symbol | |
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| ID | 4180849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 2472004 |
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| End bp | 2473350 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638068211 |
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| Product | conjugal transfer protein TrbL |
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| Protein accession | YP_674871 |
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| Protein GI | 110634663 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.774569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGGCG CCGGCGTTAT CGACGATTTC CTGTCGGTCT TCACCAGCTA CATCGACTCC
GGCTTCGGTC TGCTCGGCGG CGAGGTGGCC TTCATCGCTA CCACGCTGAT CGTCATCGAC
GTGACGCTGG CCGCGCTGTT CTGGAGTTGG GGCGCCGATG ACGACATCAT CGCGCGCCTC
ATAAAGAAGA CGCTGTTTGT CGGCGTCTTC GCCTACCTGA TTTCCAACTG GAACTCGCTC
GCCCGCATCG TGTTCGAGAG CTTCGCTGGG CTCGGCCTGC AAGCCTCAGG CACCGGCTTC
TCAGAGCAGG ACCTGATGCG TCCCGGTCTG GTCGCTCAAA CCGGGCTCGA TGCCGCCCGG
CCACTGCTGG AGAGCATCTC CGACCTGATG GGCTGGGTCG CGTTTTTCGA GAACTTCATC
CAGATCGCCT GCCTTCTGTT CGCCTGGGCA CTGGTCCTGC TTGCCTTCTT CATTCTGGCG
ATCCAGCTCT TCGTCACACT CATCGAATTC AAGCTGACGA CGCTCGCCGG CTTCGTGCTG
ATCCCCTTCG GCCTGTTCGG CAAAACGGCC TTCATGGCTG AGCGCGTCCT CGGGAACGTG
ATTTCCTCCG GCACCAAGGT GCTGGTGCTC GCCGTCATCA TCGGCATCGG CTCGACTTTG
TTTGGTCAGT TCACCCAAGG TTTCGGTGGC CAGACGCCGA CCATCGACGA GGCGATGGCC
GTCGTTCTCG CCGCGCTCTC ACTGCTCGGC CTCGGCATCT TCGGCCCTGG CATCGCCAAC
GGCATCGTTT CCGGCGGCCC GCAACTCGGT GCTGGGTCCG CTGTCGGCAC CGGGCTCGCA
GTCGGCGGCA TGGTTCTCGC CGGCGGCGCG GCTGCTGGCC TTGCCGCGAG AGGTGGCGCG
ACGGTGATTT CCACTGGAGC GGCGGCTGTC CGTGGCGGTG CAGCCGCAGC AGGAGCCGCC
TCCGCCGGCT ACAGCCTCGG TTCCCTCGGC CAATCGTGCG CGACCGGCGT TGCCTCGGGG
CTTGGAGGCA TGGCGCGGGC GGCGGGAGGC ACGGCGGCGT CACCCCTTCG CCGTGCAGTG
GGAAGCCTCA GGTCCAGTTT CTCCGCCGGC GCGAGGAGCG GCTTTGACGC GACCGGCGGC
TCTTCGACCA TGGGCACGAT ATCCGATGCC GGCGCAGCCC CTGCATCGCC GGCGCACATC
TCTGACGGCC CGCCGGCCTG GGCACAGCGC ATGAAGCGCG GCCGGGCGGT GAGCCACGGC
ATCACGGCCG CCGCGCACGC CGTCCGCTCC GGCGACAGCC AAGGCGGCGG CTCTTCCGTC
AACCTCTCCG AAGGCGACAA GAAATGA
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| Protein sequence | MGGAGVIDDF LSVFTSYIDS GFGLLGGEVA FIATTLIVID VTLAALFWSW GADDDIIARL
IKKTLFVGVF AYLISNWNSL ARIVFESFAG LGLQASGTGF SEQDLMRPGL VAQTGLDAAR
PLLESISDLM GWVAFFENFI QIACLLFAWA LVLLAFFILA IQLFVTLIEF KLTTLAGFVL
IPFGLFGKTA FMAERVLGNV ISSGTKVLVL AVIIGIGSTL FGQFTQGFGG QTPTIDEAMA
VVLAALSLLG LGIFGPGIAN GIVSGGPQLG AGSAVGTGLA VGGMVLAGGA AAGLAARGGA
TVISTGAAAV RGGAAAAGAA SAGYSLGSLG QSCATGVASG LGGMARAAGG TAASPLRRAV
GSLRSSFSAG ARSGFDATGG SSTMGTISDA GAAPASPAHI SDGPPAWAQR MKRGRAVSHG
ITAAAHAVRS GDSQGGGSSV NLSEGDKK
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