| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_2294 |
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| Symbol | |
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| ID | 4180962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 2445931 |
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| End bp | 2446797 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638068187 |
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| Product | shikimate dehydrogenase |
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| Protein accession | YP_674847 |
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| Protein GI | 110634639 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATCGG AGCGCATACT GAACCAGTGG AGTCCCGGTG GAACAACCGT CGCGTATCTA
ATGATCGGCC ACCCTACCGT TCAGGTACGC TCGCCGACGA CTTTCAATCG CTGGTTTCGC
GAACGCGAAA TGGACGCGGT TATGATTGCC GTAGATTTGA TGCCCGGCGC AGTACCGGAT
TTTTTTCGAG CGTTACGCGC CCAAGTAAGT GTCGGTGGCG TGATCGTAAC GGTCCCACAC
AAGCTCGCGG CGTTTCACGA GATGGACCGA TTATCGCGCA GGGCAGAACG GCTCGGCGTC
GTCAATGTCG TGCAGCGTCT GGATGACGGT ACGCTACTCG GGGATATGGT CGACGGCCTC
GGGTTCACCG GCGCGCTCAG GCGGAATGGA TTTTCGCCGC GAGGCAAGCG TGGCGTCCTG
TTCGGAGCCG GAGGGGTGGG CTCGGCGATT GCGCTCGCCT TGCTCGATGA CGGTATAGGC
GTACTCGACA TTGTCGACCC TGACCAAGCC CGGCTGAACG CACTGTACGA TAGGCTCGAT
AGACCGGCCG GTGCGTGTTT CACAGAAAGC CGGAGGCACG TAGGTGATGC CGATCTGGTC
ATAAATGCCA CCCCGATTGG AATGAACGGT GATCCAAGAA TGCCGTTCAA TGGTGAAGGG
CTTTCCAGCA GAATCTACGT GGCCGATGTC GTGACCAAGC CCGAAGTCAC GCCCCTGCTG
ACACTGGCGC AGTCACTCGG ATGCAAGATT CAGACCGGCA GTCAGATGGC CGACGCACAA
TTCGCGCCGT TGGCGCTCGC CATGGGAATC ACCCATCCCG ACCTCCAAAC CAAAATATTG
ACCGAGACGA GAAAGAGCGA AGCATGA
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| Protein sequence | MQSERILNQW SPGGTTVAYL MIGHPTVQVR SPTTFNRWFR EREMDAVMIA VDLMPGAVPD
FFRALRAQVS VGGVIVTVPH KLAAFHEMDR LSRRAERLGV VNVVQRLDDG TLLGDMVDGL
GFTGALRRNG FSPRGKRGVL FGAGGVGSAI ALALLDDGIG VLDIVDPDQA RLNALYDRLD
RPAGACFTES RRHVGDADLV INATPIGMNG DPRMPFNGEG LSSRIYVADV VTKPEVTPLL
TLAQSLGCKI QTGSQMADAQ FAPLALAMGI THPDLQTKIL TETRKSEA
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