Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_1666 |
Symbol | rplE |
ID | 4180183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 1790139 |
End bp | 1790696 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638067558 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_674226 |
Protein GI | 110634018 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00489085 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAGG CAGGATACCA GCCACGCTTG AAGAAGCACT ATGAGGAAGC GATCCGAAAG CAGCTCCTCG AGACCTTCAA GTATGAAAAC GAGATGCAGG TTCCGCGCAT CGATAAGGTC GTTATCAATA TGGGGGTCGG AGAGGCGACG GGCGATTCCA AGAAGCCGTC GGTAGCCGCC GAGGACCTCG CGCTGATCGC CGGCCAGAAG GCGGTTATTA CCCGGGCGCG CAATTCGATT GCCGGTTTCA AGGTGCGCGA GGGCATGCCC ATCGGCGCCA AGGTGACCCT GCGCAAGGAC CGCATGTACG AGTTCCTGGA CAGGCTCGTG AATGTTGCGC TCCCGCGCGT CCGCGACTTC CGGGGCTTGA GCCCCAAGAG CTTCGACGGC CACGGCAACT TCGCCATGGG CATCAAGGAG CACATCGTGT TCCCCGAGAT CAACTACGAT AAAGTCGATC AGATCTGGGG AATGGACATC ATCGTCTGTA CGACCGCCAA GACCGACGAC GAGGCGCGCG CCTTGTTGAA GGCTTTCAAC TTCCCGTTCC GGCAGTAA
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Protein sequence | MAKAGYQPRL KKHYEEAIRK QLLETFKYEN EMQVPRIDKV VINMGVGEAT GDSKKPSVAA EDLALIAGQK AVITRARNSI AGFKVREGMP IGAKVTLRKD RMYEFLDRLV NVALPRVRDF RGLSPKSFDG HGNFAMGIKE HIVFPEINYD KVDQIWGMDI IVCTTAKTDD EARALLKAFN FPFRQ
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