| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1564 |
|---|
| Symbol | |
|---|
| ID | 4180102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 1682232 |
|---|
| End bp | 1683029 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 638067456 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_674125 |
|---|
| Protein GI | 110633917 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00849198 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCCAC CCCTGCCGGT CAGGCGTTGG ACCTTGGCAC GCATTACAGG CCTAGTGCTG
CTAAGCGGAT GGGTGCTGCT TGGCTTGGGA GTGCTCTATT TTCTGCTAAA TTCCTGGAAT
CCGGAGCTCA TTTCGCGATA CACACCGAAT TATGTTTCCG GTCTTTGGGT CACCATCCAG
CTTGTAGTGA TCTCTATTTT GGCAGGCGCC GTCCTATCGG TCCCTATCGC CGTTGGACGC
CGAGCCGAAA GCCGGGTAAT TTCATCCCTC GCTTATGCAT ATGTCTATTT CTTCCGCGGC
ACCCCCCTGC TTGCACAGAC GTTTCTCATT TATTACGGTC TCGGCTCCTT CCGGCCGCAA
CTGGAGGCCG TTGGGCTTTG GACCTTCTTC CGCGATGCTT GGTTCTGCGC CATCTTCGCC
TTCACGCTCA ATACCGCAGC TTACCAAGCT GAGATCCTGC GCGGAGCGGT AGAAAGCGTT
GGCCGCGGCC AATGGGAGGC GGCAGCCGCT CTTGCCTTCT CGCGATGGCA GACTTTGCGG
AAGATCATCT TGCCTCAGGC TTTGCTGGTT GCGCTACGGC CGTATGGAAA CGAAATCATT
CTGATGATCA AGGGATCCGC TATCGTGGCG ATCATCACAG TGTATGATCT GATGGGTGAG
ACGCGCCGCG CCTTCTCCCG GACCTTCGAC TTTCAGACAT ATATCTGGGC CGCGCTCATC
TATCTCGTAC TCGTTGAATT GCTGCGGATC GCGACTGAGC GCATTGAGCG CCGACTGACG
CGACATCTGG GCCGCTAA
|
|---|
| Protein sequence | MPPPLPVRRW TLARITGLVL LSGWVLLGLG VLYFLLNSWN PELISRYTPN YVSGLWVTIQ
LVVISILAGA VLSVPIAVGR RAESRVISSL AYAYVYFFRG TPLLAQTFLI YYGLGSFRPQ
LEAVGLWTFF RDAWFCAIFA FTLNTAAYQA EILRGAVESV GRGQWEAAAA LAFSRWQTLR
KIILPQALLV ALRPYGNEII LMIKGSAIVA IITVYDLMGE TRRAFSRTFD FQTYIWAALI
YLVLVELLRI ATERIERRLT RHLGR
|
|---|
| |