| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1160 |
|---|
| Symbol | |
|---|
| ID | 4180751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 1269458 |
|---|
| End bp | 1270543 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638067045 |
|---|
| Product | cytochrome oxidase assembly |
|---|
| Protein accession | YP_673721 |
|---|
| Protein GI | 110633513 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1612] Uncharacterized protein required for cytochrome oxidase assembly |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.6237 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGCCG CTACCGAGTT TCCTGTTTCT CCTATGCTGA CCGATGCCGC ACGCCGCAAC
CGCCTCTGGG TTCGGATCTG GCTTTACTGC GTCATCGTCA CCCTCTTCGC GATAGTGCTC
GTCGGCGGTG CCACGCGCCT CACCGATTCC GGCCTTTCCA TCACGGAGTG GAAGCCTATT
CACGGAGTCA TCCCGCCGCT TGGCGAGGCG GAATGGGCGG AAGAGTTCGC CAGATATCAG
CAGATCCCGG AATATGAGCA GATCAACAAG GGCATGAGCC TGGAGGAGTT CAAGGGCATC
TTCTGGTGGG AGTGGGCGCA CCGCTTGCTC GCGCGCGGCG TGGGCTTCGT CTTCGCCCTG
CCGCTCCTCT TCTTCTGGGT GACCGGTCGG CTGGAACGCC ACCTAAAGCC GAAGCTCCTG
GGCATCCTGG CCTTGGGCGG GCTGCAGGGG GCAGTGGGAT GGTGGATGGT GGCCTCCGGG
CTTTCCGAGC GCGTTGATGT CAGCCAGTAT CGGCTGGCCA CGCACCTCAC CATTGCCTGC
CTCATCTTTA ATGCCACCAT GGCGGTGGCG CGCGGCCTGG CACCGCACAG CGGGAAACCC
GCGCTCGATT CGACCCGCCG CTTCGCCTTC TGGCTCGTCG TCGCCGTGCT CGTGCAGATC
TATCTTGGAG GGCTTGTCGC GGGGCTGGAC GCCGGCATGG CCTATAATAC CTGGCCGCTC
ATGGATGGGG CCTTGGTACC CCAGGGCCTG TTCGAGCATC GTCCAGCTTG GGTGAACCTC
TTCGAAAATC CCAAAACCGT GCAGTTTGTG CACCGTCTTG GGGCCTATGT CGTCCTCCTG
CTGGCTTTGT GGCATGCGAT TGCCACTTTG CGCGCCGAGC CCGACTCAAC CCATGCGCGC
AGGGCTGTCC TTCTCTTCCT TTTGGTATGC GTGCAGGCAG CGATCGGAAT CGCGACGCTT
CTCATGGTGG TGCCAATGGA TGTGGCGCTT GCCCATCAGG CGATGGCGTT GATCGTGCTT
GGCTTTGCCA CCGCCCACTG GCGTGCAACC AGGGGCGCCT ATCCGTTCAT GCAGGCGGCC
GCTTAG
|
|---|
| Protein sequence | MVAATEFPVS PMLTDAARRN RLWVRIWLYC VIVTLFAIVL VGGATRLTDS GLSITEWKPI
HGVIPPLGEA EWAEEFARYQ QIPEYEQINK GMSLEEFKGI FWWEWAHRLL ARGVGFVFAL
PLLFFWVTGR LERHLKPKLL GILALGGLQG AVGWWMVASG LSERVDVSQY RLATHLTIAC
LIFNATMAVA RGLAPHSGKP ALDSTRRFAF WLVVAVLVQI YLGGLVAGLD AGMAYNTWPL
MDGALVPQGL FEHRPAWVNL FENPKTVQFV HRLGAYVVLL LALWHAIATL RAEPDSTHAR
RAVLLFLLVC VQAAIGIATL LMVVPMDVAL AHQAMALIVL GFATAHWRAT RGAYPFMQAA
A
|
|---|
| |