Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_0995 |
Symbol | |
ID | 4181680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 1092597 |
End bp | 1093511 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638066875 |
Product | xylose isomerase-like TIM barrel |
Protein accession | YP_673557 |
Protein GI | 110633349 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCAATA TCATCGCGAC GGGCTTCAAT GCCGGTTCTA TCGACGGGGA GCTCTTCAGC CTCGAGGCAG AGCTGCGGCG GCTGGCCGAG ATCGGCGTTG ACACGGTCGA GCTGGGGCTG ACCAGCATCG ACCTCATCAG CGGCGGCCGC ATCATCAGGG AACGGGCGGA GAGGCTGAAG GCGCTCACGG CGCAATTTCC CTTCCGCTAT ACCGTTCACG GCCTGGTTTC CTCGAACTTC ATGGATCCTG CGACCCTGCG CTACCAGATG GATGCCGCCA AGGCGCTGAT CGAGATCTGT GACCAGATCG ATGCCCGGAT AATCGTCCAG CATGGCGGGC ATCTGCGCGC GGACCAGCTC TTCGACCGCG CGGCGGCGGA TGAGCGCGAA CGCGAGGCGC TGTTCGAGCT TGCCGAGTTC GCCCGTCCTT ATGATGTGCG CATTGCGTTC GAGAACATAT TCACCACCGA GCCGGGGCAA TACCGCCAGA CGCCGGCCGA GGTTGCGGCC ACGGTGAAGG CGGTCAACCA CCCCAATCTC GTGGCGCTGA TCGATTTCAG CCACGCCTAC ATCGAGTCCA CCTATCGCGG GCTGGATTTC CGCGAGCAGC TGCGGGCCAT GGCGCCGGTT GCCGGGCACC TGCACGTGCA CGATTCTTTC GGCCGCCCGA TCGGCTTTTA CAAGCCGTAC CATCTCCAGG AAGCCACCGC GCTGGGACTG GGCGACCTGC ACCTGCCGCT TGGCTGGGGA GATATGGACT GGGAAGACAT CTTCAGCGAG CTGGAGTTCC TGCCGGGCAC TGTGATGATG ATGGAGATCA ATCATCGCTA TCGCAGCGAG CAACCCGCTA GTCTCGAACG CGCCCAGCAG CTGATGGCGT TGAACGCCCG ACGCATTTCA ATCGCAGCGG AATGA
|
Protein sequence | MANIIATGFN AGSIDGELFS LEAELRRLAE IGVDTVELGL TSIDLISGGR IIRERAERLK ALTAQFPFRY TVHGLVSSNF MDPATLRYQM DAAKALIEIC DQIDARIIVQ HGGHLRADQL FDRAAADERE REALFELAEF ARPYDVRIAF ENIFTTEPGQ YRQTPAEVAA TVKAVNHPNL VALIDFSHAY IESTYRGLDF REQLRAMAPV AGHLHVHDSF GRPIGFYKPY HLQEATALGL GDLHLPLGWG DMDWEDIFSE LEFLPGTVMM MEINHRYRSE QPASLERAQQ LMALNARRIS IAAE
|
| |