| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0827 |
|---|
| Symbol | |
|---|
| ID | 4179660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 915784 |
|---|
| End bp | 917499 |
|---|
| Gene Length | 1716 bp |
|---|
| Protein Length | 571 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638066707 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_673392 |
|---|
| Protein GI | 110633184 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.706672 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCATT CGGTAGGTCT GGCAACCGCG ATATCGGGAC GCCGCCAAGA TCCACTCGGC
AAGCTCGTCG TCGTCCTGGC GGTGACTGCC GTGGTCCTGC TTTTGCTGCC CATCGCGGGA
CTGATCATGA GCAGCCTTGT CTCCGACGAG ACCAAGGCGT TCGGACTGGA AAACTACCAG
TCCATCATCA ACTCGCGCAA ATTCACCACC ATCATCACCA ACACCGCGAT CCTCGCGGTG
GGCAGCCTTG CCGTGATGTT CCTGATCGCG ATTCCTCTGG CCTGGCTCTA TGCCCGCACG
GATTTCCGCT GGCGCGGGGC CATCCTGATC GCCGCCACGA GCCAGATCGC CATTCCGGGA
TTTCTCGTGG CCCTGGGCTA CATCTTCCTG CTAAATCCCT CGAACGGCCT TATCAACCTG
TGGTGGCGCG AGGCCGGAGG ACAGGGATCG CTCGTCACCG TCTATTCGAT GCCATGGATC
ATCCTGCTCC AGGGCCTCAC CATGGTCGGT CCCGCCTTCT ATTTCCTCGC TCCGGCATTT
TCCAACGTGG ACGGCTCCAT CGAGGAAGCG GCAAGCGCCC ATGGCGTGAG CAAGTTCGAA
GCGCTGTTCA AGATCCTTCT GCCCATGACG GCGCCGGCCC TGATCAGTAC GGCGCTGTTC
TTCCTCGTCA TCTCGGTGGA GACCTTCGAC TATGCCGGTA TGCTGGGCAT GCCCGCCCGC
ATCGACGTGG TGGCCACGTG GATCTATCAA TATACTCAAT CCTCCATGAC CCTGCCCCAA
TACGGGCGCG CCTCGGCCAT CGGCACCATG ACGGCGGCGG TGCTGTTGGC GCTCATCCTC
GTCCAGATCC TGGTGTTCAA GCGCAGCGCC GATGCCGGGA CGATCGGCGG GCGTGCGCGG
GTCGCTTCGG TGCGGCTTGG CAAGGGCGCG CAACTGGCCG CGATGACCGG CTTTTCGATC
TACGGCTTTC TGGGCATCGT CCTGCCCTTC CTGATGCTGG TCTGGACGGC GCTGCTGCCC
GTGCCGCAAC CCCCGAGCCT CAAGGCCGTG TCGCAGCTTT CGCCGGCCGG GTTCGGGCCG
CAATTCTGGA CCGAACTGGC CAATGTGGGG GGAACAACGC TGTTCATCAC GGTCTTCGTG
CCCACCTGTG TGCTGCTGTT CACGATCGCC ATGTCCTGGG TGTCCAAGCG CATGCCGGCG
CTGGGCAGGA CGATCGATCT CGTTACCGTG GTCAGCCTCG CCGTTCCCTC GATCGTCATC
GCCGTCGTCT TCAATATCGG CGGGCTGGCC GTGCACCGCT ACGTGCCGAT CTTCGGCACA
GTCTGGCTGC TGGCCATCGC CATAGGCTCA CGCTATGTGG CAACGGCTCA CCGCATCACC
GACAACGCCT TCCGCCAGCT AAACCCAGAA ATGGCCGAAT ATGCCCGGAC GGCGGGCGTG
ACCTCGGGCC GGACGCTGTT CTCCATCGCC GTCCCTGCCG CGCGCACCGG GCTGATCTTC
GCCTGGTTCT GGGTCGCCCT GCTGACGCTG CGGGAACTGC CCATCACGCT CATAATGAGC
AATTACGACC TGCAAACGCT GGCCTCGCGC ATCTTCCTCT ACAACAGCTC GGGCCAAACC
CAGCAATCGG CCGCCCTATC GGTGGCGCTG TTCGCCGTCG TGACGGTGTT TCTCGCCGGC
CTTCTCTACC TCACTCGGCG CCCCCGCGCC CGCTAA
|
|---|
| Protein sequence | MSHSVGLATA ISGRRQDPLG KLVVVLAVTA VVLLLLPIAG LIMSSLVSDE TKAFGLENYQ
SIINSRKFTT IITNTAILAV GSLAVMFLIA IPLAWLYART DFRWRGAILI AATSQIAIPG
FLVALGYIFL LNPSNGLINL WWREAGGQGS LVTVYSMPWI ILLQGLTMVG PAFYFLAPAF
SNVDGSIEEA ASAHGVSKFE ALFKILLPMT APALISTALF FLVISVETFD YAGMLGMPAR
IDVVATWIYQ YTQSSMTLPQ YGRASAIGTM TAAVLLALIL VQILVFKRSA DAGTIGGRAR
VASVRLGKGA QLAAMTGFSI YGFLGIVLPF LMLVWTALLP VPQPPSLKAV SQLSPAGFGP
QFWTELANVG GTTLFITVFV PTCVLLFTIA MSWVSKRMPA LGRTIDLVTV VSLAVPSIVI
AVVFNIGGLA VHRYVPIFGT VWLLAIAIGS RYVATAHRIT DNAFRQLNPE MAEYARTAGV
TSGRTLFSIA VPAARTGLIF AWFWVALLTL RELPITLIMS NYDLQTLASR IFLYNSSGQT
QQSAALSVAL FAVVTVFLAG LLYLTRRPRA R
|
|---|
| |