| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0701 |
|---|
| Symbol | |
|---|
| ID | 4180608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 775722 |
|---|
| End bp | 776507 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638066580 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_673266 |
|---|
| Protein GI | 110633058 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.684816 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATGA ACGACAAAAC AAACACCAAA ATGAATCGCA GGGACAAGCT TCGCGAGGCC
ACCATGGCCG AGATCCGGCA CATCGCTCGC GAGTTGCTGG TCAGCAATGG TGCCCAGGCA
GTTACCGTCA ACGCGGTTGC CCGGAAAATG GGTATGAGCG GCCCGGCTCT TTACCGCTAT
TATTCCAGCC AAAACGAGCT GATCGAAGCG CTGCGGCTCG ACCTCTATTC AGAGCTGGTC
AACACCCTCA CATCTGCGCG GGAACGCAGC GGCGCAACCG ACCCGGAATG CCGCCTCCTC
GCCATCTGCA GGGCTTTGCG CCAGTGGGCC GTCACCCATC CTGCCGAATT CGGCTGCCTT
TTCGCCACGC CTGCGCCCAT GGGTCTCGAG AGGTGCACCA ATGCCAGCCA GTCCGGCCGG
GCGTTCGGAC AGGTTTTCCT GGAGGAGATC GTGGCCATCT GGCGCACGAA GCGGTTTCCA
ATACCGAGCC TGGAGGATAT GGATCCCTCC CTGGCCGAGC AGTTGTGCAA ATATTCCGAG
AGAATTGACG GCGCGCTGCC GCCCGAGGCC GCCTATATCT TTCTTTCCTG CTGGATGCGG
CTTTACGGCC TGCTCTGCAT GGAGGTTCTG AACCAGATCG GCTTTGCCTA CAGCGATCTG
GAGCCCGTAT ACGAGGAATG CCTGCAGGAC CTCTGCAGGC TCCTTGATAT TCCCTATGAG
GAGCCAGTGC CTGCCGGACA CGCTGGCACC ATCAGAAAGG ACAGGCTGCG CGAGGCGGGT
CTCTAG
|
|---|
| Protein sequence | MPMNDKTNTK MNRRDKLREA TMAEIRHIAR ELLVSNGAQA VTVNAVARKM GMSGPALYRY
YSSQNELIEA LRLDLYSELV NTLTSARERS GATDPECRLL AICRALRQWA VTHPAEFGCL
FATPAPMGLE RCTNASQSGR AFGQVFLEEI VAIWRTKRFP IPSLEDMDPS LAEQLCKYSE
RIDGALPPEA AYIFLSCWMR LYGLLCMEVL NQIGFAYSDL EPVYEECLQD LCRLLDIPYE
EPVPAGHAGT IRKDRLREAG L
|
|---|
| |