| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0132 |
|---|
| Symbol | |
|---|
| ID | 4179595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 162079 |
|---|
| End bp | 163191 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638066012 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_672702 |
|---|
| Protein GI | 110632494 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.223413 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGTGGA CGCGGCTCAA AGCACTCATC ATCAAGGAAT TGCTGGCGAT CCTGCGCGAT
CCGCGCGGGC GGCTGATCCT CATCGGCCCG CCGATACTGC AACTCGTCAT CTTCTCCTAC
GCCGCGACGC TCGAAGTGAA GAATATCGAC GTACTCGTGC TCAACCAGGA TTCCGGCGCC
TGGAGCCAGG AACTCGTCAA CCGCATCGCC GGCGCGCCCA CTTTCCGCAG TATCGAGAGG
GTTGGAAGCC CGGACGCGCT GCGCGCCCGC ATCGACGCGC AGCAGGCGAT CGCAGCCATC
CATATCGGCC CGACCTTCTC GGGCGATATT GCCGCCGGCC GGCCTGCCGA CCTGCAGATC
ATCCTGGACG GGCGGCGCTC CAACGCCGCC CAGATCGTCG CGGGCTATCT CAACCAGATC
GTAAACCAGC TTTCCGCCGA AATAGGCGCC GGAGCGCGCG GCGCCGGACA GGCCGTCACC
GTGGTGCCAC GCAACTGGTT CAACCAGAAT CTCATCTTCC AATGGTTCAT GGTGCCCAAT
CTGGTCGCCG CCATCGCGCT TCTCATAGGC CTGGTGGTCA CCGCGCTTTC CATTGCGCGC
GAGCGCGAGC TCGGCACTTT CGACCAGCTC ATGGTCTCGC CGCTCAGGAC GCATGAGATC
CTGATCGGCA AGGTGATTCC GCCCATGATC ATCGGCACCT TCCACATGAC GATCTACATC
CTGGCGGCTG TGTTCATCTT CGGCGTGCCG CTTCGGGGCT CGCTCCTTAT GCTCTATGGC
AGCAGCATCT TTTACCTGCT CTCGGTGGTG GGCGTCGGCC TCTTCATCTC CGCCCTTTCG
ATGACGCAGC AGCAGGCGAT CCTCGGCGCC TTCCTCTTCA TGGTGCCGGC AATGCTCCTC
TCCGGCTTCG CCACGCCGAT TGAGAACATG CCGGACTGGC TGCAGCCAAT CACCTATGCC
AGTCCGCTGC GCTATTTCCT CGTCATCGTG CGGGGCGTGT TCTTGAAGGA CTTGCCTTTC
AACGAAGCGA TGAACAACAC GATCCCGCTC GCCATCATCG CCTTTCTCAC GCTCGCGGCT
GCGGCATGGC TCTTCCGACG CAGAATGGAG TGA
|
|---|
| Protein sequence | MWWTRLKALI IKELLAILRD PRGRLILIGP PILQLVIFSY AATLEVKNID VLVLNQDSGA
WSQELVNRIA GAPTFRSIER VGSPDALRAR IDAQQAIAAI HIGPTFSGDI AAGRPADLQI
ILDGRRSNAA QIVAGYLNQI VNQLSAEIGA GARGAGQAVT VVPRNWFNQN LIFQWFMVPN
LVAAIALLIG LVVTALSIAR ERELGTFDQL MVSPLRTHEI LIGKVIPPMI IGTFHMTIYI
LAAVFIFGVP LRGSLLMLYG SSIFYLLSVV GVGLFISALS MTQQQAILGA FLFMVPAMLL
SGFATPIENM PDWLQPITYA SPLRYFLVIV RGVFLKDLPF NEAMNNTIPL AIIAFLTLAA
AAWLFRRRME
|
|---|
| |