| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0119 |
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| Symbol | |
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| ID | 4179582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 145515 |
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| End bp | 147590 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638065999 |
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| Product | type III secretion FHIPEP |
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| Protein accession | YP_672689 |
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| Protein GI | 110632481 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4789] Type III secretory pathway, component EscV |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.717774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCTCA TAAAGCCCTT GGCCGCAATA GCGCGGCAGA AGGACGTCTT TCTCGTCCTC
GTATTCGCGC TCGTCCTATT GATGGTCATT CTGCCGTTGC CGCCCGCAGC GATGGACCTG
ATGATCACGC TGAATGTCAG TGCGTCCATC ATCATTCTCT TGATGTCGCT GCAGATGCAC
AATCCGGTTC AGTTCTCCAC CTTTCCGGCG CTGCTTCTGG TGACGACGCT GTTTCGGCTT
TCGATTTCCA TCTCCACCAC AAGGCTTATT CTGCTTGAGG GGGATGCTGG CCGCATTGTT
GAGACCTTCG GCCAGGTGGC GATGGGGGGC AATCTGGCCG TCGGGCTGGT GACGTTCCTC
ATCATCACGG TGGTGCAGTT TCTGGTCATC ACAAAAGGCG CCGATCGCGT CGCCGAAGTG
GGCGCGCGTT TCACGCTGGA CGGCATGCCG GGCAAGCAGA TGAGCATCGA TGCGGATGTC
CGGGCCGGCA ATATGGACCA GCTCGATGCA AGGCATGCGC GACAGAACCT GGAGCGCGAA
GCCAAGCTTT TCGGCGCCAT GGACGGAGCA ATGAAATTCG TCAAGGGAGA TGCGATAGCC
GGCCTTGTCA TCACTGTCAT AAACCTTGTG GGAGGCGTGG CCATAGGCAT GGCCCAGCGG
GGGGTGGGTT TCGGCGAGGC TTTGAGCCTC TACGCGCTCC TGACGGTCGG CGACGGGTTG
GTGGCGCAAA TCCCCGCGCT TCTGATCTCC GTTGCCGCGG GCAATATGGT TACGCGCGTA
ACCAACCCCA ACGGCATGGA TCTGGGCGCG GAGATCGCTC AGCAGTTCGT CGCCAACCGC
CGCACGATCG TCATGGCCGG CATCATCATC GCCCTGTTTG GTTTGGTCCC CGGCTTTCCA
ACATGGATTT TCGTTTCTGT TGGTTCAGCA ATGACGGGGG GGGTAATTTG GACGATACGC
CGGCAACACC GGGACGTGCT GAGCGCGCAG ACGGATTGGT CCCTTCGCCT GGATCTGCTT
CAACGGCAGT GTGCCGAAAT TGCCATGCGA ACCGGAGCGA AAGAAGCGGT AAGGCTCATT
CTTCCAAAGG AGATATATAA GCTGGATGTC ACTGCGTTCT TTTCCGCTTT CGAAGCCGTC
AGGATAAGCA TCGCACAGGA ATATGGAATA CCGACCGGCT ATTGGCTGTT TGAAGTGGAC
GAGGGATCGC CGCACTCATA CCAGATATAT GTAAACCAGG AGCTCGCCGA TTGCGGAATC
TTCAGGGCCG ATAGCCTGTT CGTAAAGGCG CATACTTCCT ATCTCGATGC CCTCGGAATC
CCGTGGCTAA GCGGCTTTGG CCGCAGGGAG GGGGCGCTTG TCCCCACCGA TCAGGAGCAA
AGGCTAGCTG AAGAGAACAT CGTCTATTGG CGCCCGATGG AGCAACTGCT GATGCACCTG
AAGCGGGTAG CAGTTGAACG GCTCGACGTT ATGGCCAGCC TGCAGAACAT AACAGCCATC
CTGAATGAAG TGCAAACGAA CAATCCGGCG CTCGTTGGCG ATCTGCGGGA AGCGGCATCG
AACAATCAAA TCGCCGGCGT TATACGGAAC CTGTTGCGCG AGCGCATCCC CGTCACCAGC
CGGGTGCGCA TTCTCGAGGG TATTCTGAAA TGGTCGCAGA AGCGGCCGGA CCCCGGCTAT
CTGGCCCAGA AGGTGCGTAT CGAAATCGCT GATTTCATTA CGAAGCGGTT TGCCGCCGAT
GGCTTCCTGC CGGTGGTGGT GGTTTCGCCG ACTGTTGAAT CTCTCATGCG CGAGGGAATG
CGAAACACCG AGGAGGGCAA TTTTCTCATT CTGGAGCCTT CAATCTCAGC CTATATCGCC
AAACAGGCCA AACAGATCTG TGGGGAAGAA TTCCGGCGCG GTCACGATCC GGTCCTGATC
ATGCAGCAGG ATGTCCGCCT GGCGATGCAT AACATCCTTT ATGAGCACGG CATACACCTG
CCGGTACTGG CTTATCAGGA GATCACGCCT GAAACGGTGA TTTATCCGGT CGGCTTCCTG
TTGGCCGAAC CTGGCGAAGA CGCAGGGGAA CTGTAG
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| Protein sequence | MNLIKPLAAI ARQKDVFLVL VFALVLLMVI LPLPPAAMDL MITLNVSASI IILLMSLQMH
NPVQFSTFPA LLLVTTLFRL SISISTTRLI LLEGDAGRIV ETFGQVAMGG NLAVGLVTFL
IITVVQFLVI TKGADRVAEV GARFTLDGMP GKQMSIDADV RAGNMDQLDA RHARQNLERE
AKLFGAMDGA MKFVKGDAIA GLVITVINLV GGVAIGMAQR GVGFGEALSL YALLTVGDGL
VAQIPALLIS VAAGNMVTRV TNPNGMDLGA EIAQQFVANR RTIVMAGIII ALFGLVPGFP
TWIFVSVGSA MTGGVIWTIR RQHRDVLSAQ TDWSLRLDLL QRQCAEIAMR TGAKEAVRLI
LPKEIYKLDV TAFFSAFEAV RISIAQEYGI PTGYWLFEVD EGSPHSYQIY VNQELADCGI
FRADSLFVKA HTSYLDALGI PWLSGFGRRE GALVPTDQEQ RLAEENIVYW RPMEQLLMHL
KRVAVERLDV MASLQNITAI LNEVQTNNPA LVGDLREAAS NNQIAGVIRN LLRERIPVTS
RVRILEGILK WSQKRPDPGY LAQKVRIEIA DFITKRFAAD GFLPVVVVSP TVESLMREGM
RNTEEGNFLI LEPSISAYIA KQAKQICGEE FRRGHDPVLI MQQDVRLAMH NILYEHGIHL
PVLAYQEITP ETVIYPVGFL LAEPGEDAGE L
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