| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0110 |
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| Symbol | |
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| ID | 4179573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 138551 |
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| End bp | 139213 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638065990 |
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| Product | type III secretion system protein |
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| Protein accession | YP_672680 |
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| Protein GI | 110632472 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4790] Type III secretory pathway, component EscR |
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| TIGRFAM ID | [TIGR01102] type III secretion apparatus protein, YscR/HrcR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.23338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGGCGG TTGAGAACTT CCCGGCTATT CTGCCGACCA TCATCGCTGT AATGGCGCTG
AGCTTCATTC CGTTTATCGT GGTAATGGGC ACGGCGTTCA CAAAGATATC CATCGTGTTG
ATGCTGTTGC GCAATGCAAT CGGCGTGCAA CAGGCCCCTT CGGGGCTGGT GATCAACTCC
ATCGCCTTGA CGCTGACGGT GTTCGTGATG GTCCCGGTCG GGAATGCCAT CATCACCCAG
GTGCAGCAGC AGCAATTGGG CTTTACTGGC TGGGAAAATG TCTCCCAGCT GTATTCTGTC
GTTTCTGAGG CGTTTACCGG TTACCTAAAG CAGTTTTCCT CTCCGCGTGA ACTCCAGTTT
TTCATGGATG CGGCCAGGAA GATGTGGCCT GAAACACTGC ATGGGCAAAT TACAACCGAC
AACGTTTTCA TCCTTTTACC CGCACATGTG ACATCGGAAC TTACAAGGGC TTTTCAGATC
GCCTTTCTCA TTTTCCTGCC CTTTGTTGTG GTCGATATGG TGGTTTCCAA TATCTTGCTG
GCCATGGGGG CGATGATGGT GCCGCCCATG CTGGTGTCTC TGCCCATCAA GATACTGTTG
TTTGTCGCCG CCGACGGCTG GGCTCTTCTG CTCCACAATC TCGTATTGAG CTACGCGCGA
TGA
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| Protein sequence | MTAVENFPAI LPTIIAVMAL SFIPFIVVMG TAFTKISIVL MLLRNAIGVQ QAPSGLVINS
IALTLTVFVM VPVGNAIITQ VQQQQLGFTG WENVSQLYSV VSEAFTGYLK QFSSPRELQF
FMDAARKMWP ETLHGQITTD NVFILLPAHV TSELTRAFQI AFLIFLPFVV VDMVVSNILL
AMGAMMVPPM LVSLPIKILL FVAADGWALL LHNLVLSYAR
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