| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0104 |
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| Symbol | |
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| ID | 4179567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 133709 |
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| End bp | 134509 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638065984 |
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| Product | YscJ/HrcJ family type III secretion apparatus lipoprotein |
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| Protein accession | YP_672674 |
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| Protein GI | 110632466 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4669] Type III secretory pathway, lipoprotein EscJ |
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| TIGRFAM ID | [TIGR02544] type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.480375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACTCCC TAGCCTTTCC TCCGCTGGAT TGCTCTCGTC CCCGCCTGAG CCGGCTTGGC
GCGGTGCTCC TCGCTTTTGC GCTCTGCGCC TTTTTATCCG CCTGCAAGGT GCCCCTCTAT
TCCGGGTTGA GCGAGCAGGA AGCCAACGAC ATGCTCGGAA AGCTTCTGGA GTACGATATC
GATGCCACAA AGCAGGCGGA CAAGGATAAT TACATCACGC TGCTTGTGGA CGAGGCGCAG
TTTGGCCAGG CCGTGGACCT TCTTAAAAGT TTCGGCCTGC CGCGACCTCA ATTCGAGACG
ATCGGCAAAG TGTTTACCGG CGACGGGCTT GTGACAAGCC CGGTAAAGGA GTGGGCACGC
CTGAACTTCG CGCTATCGCA GGAATTGTCG AAGATGGTGT CTTCCATCCC CGGCGTGGTT
TTGGCGGAAG TGCAAATAGC CAACCCGCGC AAAACCACAC CTTTCGATGA AGTGCCGCCG
CCCAGCGCCT CCGTCCTTGC AATCGTAAAC AGGAGTGCCG TGACCGCTGA GCTCGTTCCG
CGGATAAGGC AGCTTGTCGC CCACAGCATC GAAAACGTTC AGTACGAAAA GGTTGGCGTG
GTCGTGTTGC CTGTAGATCC ACCTCCCCCG CCCACCATCG AATTTGTATC CCTGGGCGGG
GTGGCCATCC GCAAGGGCGG TGAGGAGCGT GCCGTCCTTT TGGCCGGCGG AATAGCGGTT
TTCAGCCTGG TTCTTGGCGC GGCGGCAGCA CTAAGCGTTG GAACCTACTT GCGCTCGCGC
CGGAAGGAGC GCGTCGGATG A
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| Protein sequence | MHSLAFPPLD CSRPRLSRLG AVLLAFALCA FLSACKVPLY SGLSEQEAND MLGKLLEYDI
DATKQADKDN YITLLVDEAQ FGQAVDLLKS FGLPRPQFET IGKVFTGDGL VTSPVKEWAR
LNFALSQELS KMVSSIPGVV LAEVQIANPR KTTPFDEVPP PSASVLAIVN RSAVTAELVP
RIRQLVAHSI ENVQYEKVGV VVLPVDPPPP PTIEFVSLGG VAIRKGGEER AVLLAGGIAV
FSLVLGAAAA LSVGTYLRSR RKERVG
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