Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_0080 |
Symbol | |
ID | 4179543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 107042 |
End bp | 107953 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638065958 |
Product | LysR family transcriptional regulator |
Protein accession | YP_672650 |
Protein GI | 110632442 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAACTTCA AGCAGCTGGA AGCATTCTAT TGGCTGGCTA AGCTGGGCAG TTACCAAAAG GTGGCCAAGC AGATAAACCT CACTCAGCCA GCTGTATCGA TTCGGGTCGG CAGCCTTGAG TCCGAACTCA GCGCGCCTCT GCTGCAGCGC GACCAGCCAG GCATCGTGCT TACGGAAAGA GGCCATGAGG TCGCCGAATT TGCGAGCGAG TTCATGCAGC TCTACGAGCG AATGCAGAAG TCTCTTGTGA GGCGCGAGCG CGGCGCCTTC GTCATCGGCA TTATCGAGCC GATCCTCTAT AGCTGGGGGC AAGAATTCGC CCGGCAGGTG AGAAAGGCTT ATCCCAACGT GGAGTTTCGG GTGACCGGGA ATGCGGCGAT GCGCAATCTG GTCGCCGAGC AGGCTGTTGA CCTTGTATTC GCCACCGCAA CGGTCAGCAG CGATCCTGTA CCGCAGAGTT TTGCCATGCG CGCGGTCATG GGATGGGTAG CCAGTACGAA GCTCGAAATC GATGACAGCG AGCCGCTCGA CGCCCAGGCG CTAGCTCGCC TGCCGCTGAT TTTTTATCCG CGTGATGCCT CGCAGGCCGC GCCTCGACTC GAGGCGGTGG CCGAAGTCAG AGCGCTGGAT CATCTTGAGG ATACGGCTTC GGCCCTGTCG ACCGCCGCGC AGATGGTCTA TCGTGGTTTT GGGGTAGCGC CCCTCGTTCT CACGCCATTC ACCAGGGCCA TTGCCGAGGG CGACGTGCGG CCGCTGAATA CGTCCGTTCC GCTGCCGCTG ATGGAAATAC GCTGCTACTA CATGAACGCG CCGCGTCGCA GGATGGCACG CGACATCTAT GCCATTGCCG AGGAAGTGGC GCAGGACTGG TGCGAGAAGC ACCCGACCTA CGCCACATTC CTGCCAGCCT AG
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Protein sequence | MNFKQLEAFY WLAKLGSYQK VAKQINLTQP AVSIRVGSLE SELSAPLLQR DQPGIVLTER GHEVAEFASE FMQLYERMQK SLVRRERGAF VIGIIEPILY SWGQEFARQV RKAYPNVEFR VTGNAAMRNL VAEQAVDLVF ATATVSSDPV PQSFAMRAVM GWVASTKLEI DDSEPLDAQA LARLPLIFYP RDASQAAPRL EAVAEVRALD HLEDTASALS TAAQMVYRGF GVAPLVLTPF TRAIAEGDVR PLNTSVPLPL MEIRCYYMNA PRRRMARDIY AIAEEVAQDW CEKHPTYATF LPA
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