| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0047 |
|---|
| Symbol | |
|---|
| ID | 4179491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 58073 |
|---|
| End bp | 62398 |
|---|
| Gene Length | 4326 bp |
|---|
| Protein Length | 1441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638065924 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_672617 |
|---|
| Protein GI | 110632409 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01451] conserved repeat domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAGC CGGTCTTTCA CTCCGCTGTC GCAAGCAGCT TTCTTAGTCG TCGCCAAAAC
ATAGGTGGGG CGGCAACACG GCGGCCGGGG GCCGTGCGCC GATATCCCCC TGGTCTTCTC
AGGAGTTCCC TTACCGGTTT CTTGTTTTTA GCGGCTTGGG TTGCGTTCGG CACCACGGAA
GAGGCTCGTG CCCAAGCGGG CCCCACCGTC TCGTGCACGA CGGACGGCGC CATTTTCAAC
ACGGCATACG ATTCCTCGAG TGGCGGCATG CTGACTTCGG GCACCGATGC CAACTGGGAC
GTCGCCCTGA CAACCACGGA TATTACCGGT CCGCCGCCGG GAGGTCTGAC CTACGCCGAC
GCCGTCGTCG TAGATGATCC ACCTGCCAAC TACACGACCT CGCCCTTTGG CAACGCCAAC
TGGATTTCTC ATAACTCCAC TGCCACTCAA CCCACCCCCG AAAATTACGA CATCTTCTAC
CGCTACGAGT TCAGCCTCGA TCCCTCGGTC GACCCCTCGA CGCTCGATCT GCAGATGACC
TTTTTTGCGG ATAACTCGGT TTACGAGGTG TGGGTGAACG GGGTCGACCA GAATATCCAA
TCCGACTACG CTCCTGAGGA TCCGTATTTC TACAGCGGAT TCCAGGCCGG CAACGGAGCT
AGCGGTGCCA TGAACGGCGC CTGGCAGACC GGCCTCAACA CCATCGTCGT CCACATAAAG
TCCGGACCTG GTGCGCAGGC GTTCATGGCG CAAATCGAGT CGACCTCCGT GTGCCAGCCA
ACGCTGACCC TGCGGAAGAT TGTCGACAAC TCTCAAGGGG GCAGCGCCGG GCCGGGCGAC
TTCACCCTGC AGGCTGAGGG GCCGACAACG ATTCAAGGCG TGATGGGCGA CCCTGCCGTC
ACCGATGCGT CGGTCCCGGC GGGCACATAT GCGCTGAGCG AGTCCTACAC TGAACTTGGC
TATGCTGCTT CCGAGTATAG CTGCGCGATT GACGGCGGGG CAGCAACGGA TGGCAATTCC
GTGGCATTGG AAAACGGTCA AAGCGCCGTC TGCACGATCA CCAACACATT TTCTCCGTCC
TTCGGCTCCT GCAGCCCATC CATGTATCTG GCGCAGAACG TTCCGACACA GCTCTTCCGC
TTCGAAACCT CGGATAACCC GTTCGACGTC AATCCGATAG GGCCAGCCTC GAATAACCAG
TACAACGGCA TCGCGATGAA CCCCATAGAC AACTATATCT ATGGCTTCGA GATCAACACT
ACCCCCCCAC GGTTGGCGCG CGTTGGCAGT GACGGCGGCG TGCAGGTGCT CGGAGAGATT
GCCGGCTTTC CGAATGCCAC TGTCACAGGT GAATTCAGTC CGGACGGCAC ACTCTATTCG
GCGACTGCCG GTCGGCTCTA TACCGTTAAT GTAACAAACA GAACGGCGAC ATCCGTGCCG
CTGACCGGGG CCGCCACCCA CGGTCCGGAC CTCGCATGGT ATAACGGGCT GCTCTACAGC
GTCACCGGTA CTGGCCAACT CGTTACGATC GACCCGGCCA CGGGCTTTGT CGACACCGTC
GGCGAGACCG GCCTGACACA GAATTCGTTC GGCGGCATGT TCGGCGCCAG CAACGGCATC
TTCGGCTCGA ACAATGTTGG CGGCTTCTAC CGGTTCAATG TAGAAACAGG CCGCGGAACA
CTCATCTCAG ACCTTCAAGG CTCGGGCCAG AACGACGGCG CCAAATGCGC CACCACGCCG
CTGACCTTTC CGGCCGACGT GACGATCGCC AAGGACGACG GCAGCGAGAC CTACACGGCG
GGCGGCGAGG TGGTTTACAC GATCGTCGTT TCCAATGACG GTCCGTTCGG GGTGGCAGGG
ACATTGGTGA ACGATCCGCT CCCCGACGGT ATCACCGATG CGGAGTGGAC TTGCGGCAGC
CCGACCGGCG GTGGGTACTG CAGCGTGCCA AGCGGCACGG GCGCCATCAC CGACGTGCCG
GTGGACCTCC CGGTGGACGG CGACGTGGGC AGCTCCGTCA CCTTCACGCT CACCATGACG
GTGCCGGCAG ACTTTGAGGG CGATCTCGTC AATACGGCGA CGGTCACCAA CCCATCTGAC
GTGCCGGATC CCGACCCGAA CGACAACGAA TCCACGGACA CCAACACGGT GCCCGTTATC
CGTAAGGTCA AGGAGCTGGT TGGCGAGAGC GGTGAACTGG CCGGTGTTGC CGAGCCGGGC
GAGACGCTCA CCTACGAAAT CACGCTCACC AACCCCTATG ACTCGGCGCG CGGCAGTTAC
GAGCTGATCG ACGATTATGA CGAAAACCTG ACGGTGGTAG ATGCCGCCGG CGGCACGGAC
GATGGCGATC TGATCACCTG GACGGGGCTC ACCGTTCCGG CGCACGACGG AACCAATCCG
GGCCAACTGG TGCTCACGGT ACAGCTCCAG GTCGTCGATC CGATCCCCGA GAGCGTAACC
AGGATCAGCA ATATCGTCTA CGAGCCCAAT GAGATCGTTG ACTGCCGGGT GACGCCCACC
CAGTGCTACG AATTGCCGGC CTCCGCGCGT ATCCTGCGGA TGAAGCAATT GGTCGCCGAG
GATGGCCTCA CGGAAGGTGT TGCCGAGCCG GGCGAAAGGC TCACCTACGA GATCACGCTC
ACCAATACCG GTGGCCCGGC GGACGACTAT GCCATCCAGG ACCTGCTCGA CGAGAACACT
GTCTTTGTCT CGGCCGACAA TGGCGGCACC CACTCGGGGG GCAATCCCGG CGGTGGTGTG
GTGGATTGGA CCGGGCTCAG CATTCCGGAG CACGACGGGA CCAATCCGGG CCAACTGGTG
CTGACGGTGA TAGCGACGGT GGTCGACCCA CTGCCCGACG GAGCGATTGG GATATCCAAC
ATGATCAAGG AGCCGGGCGA CCCGGATCCC GTATGTCCGT CGGACGACTG TGTGACGGTG
CCGTCCCAGT TGACCGGGCT CGAGTTGGTC AAGACGGGAA CCTATGAGGA CACCGACGGC
AACGGCTTCG CCAATGTGGG TGACACGATC CACTACAAGT TCACGGTAAC CAATACCGGG
AACGTGGTGC TGCAGGACGT GGTTCCGGAG GATGCCGGTC CGACATTTGA CGGCCAGGAA
GGCGGCGGCG AGCTGTCGGC TTTCGATCCG GCCTCGGCAA CGCTGGAGCC GGGCGAGGAG
ACTGTGTTCG AGGCCAGCTA TGTCCTGACG CAGGCCGATA TCGACAATGG AGCCGGTGTC
GAGGAGGGCG TCGAGAACAC GGCTACGGCG GTAGGTTATG CCAATGGCGA TCGGGTAACC
GGTACGGAGG TGAACTCACC AGGCAGCGGA ACCTCTTTGG ACTTGCCGGC TGCGGCGAGC
AATATCTCGA TTGCGAAGAT CGCCAATCTG CGCGCCATCC GGCGCGGCGA GCAGGCGCCG
TTCACGATCC GGGTGACGAA CCTTGCCGGG TCGCGGGTGG ACGGGCTGAC GGTGGTCGAC
CGGATCCCGC CGGGCTTCCG CTATGTGGAG GGCTCGGCGA CGGTCGGCGA TGTTGCCGTG
GAGCCGGTGG AGGCGGGGCG CGAGATCCGC TTCGAGAACC TGTCGCTGGA AGGCAATCAG
GAAATCGAGA TCCGGCTGCG AATGCTGGCC TTGAGCTCGG CGGGTCCCGG CGAGCATGTC
AACCGGGCGC GCGCCGAGGA TGCCTCGGGA CGGCAGCTGG CGCCGGAAGC GCAGGCGGTG
GTGGAGATCC TGGCGGAGCC GGTGTTCGAC TGCGGCGACG TGATCGGCAA GGTGTTCGAC
GACGTCAACC GCAACGGCTA CCAGGACCAG GGCGAGCCGG GGCTCCCCGG CGTGCGGGTG
GCCACCGTCA AGGGCTGGCT CATCACCACG GATGAATATG GCCGCTTCCA TGTGGCCTGC
GCCGACCTGC CGGAGGCGCG CATCGGTTCG AACTTCATCA TGAAGCTGGA CACGCGCACG
CTGCCGACGG GCTATCGCCT GACGACGGAG AACCCGCGCG TGGTGCGGCT GACGGCGGGC
AAGACGACGA AGCTGAACTT CGGCGCCGCG GTGGGACGCG TCGTCCGTCT GGAATTGACG
GACGCGGCCT TCGCGCCGGA CGCCGCGCAG CTGAAGCCGG AATGGGCAGA GAGCGTCGAC
CGGCTGATCG GCGTCCTTGC CGAGGAGCAG TCGGTGCTGC GGCTGACCTA CTTCTACGGC
GGTGTCGACC GGGCATTGGC CGGCGCGCGG ATCATGCAGG CGAGAGAGCT GATCGCGGAA
CGCTGGCGCA GGAGAGGAGG TGCTTACCGA CTGGAGATCG AGATGCGAGT GGAGGCGGTT
CAATGA
|
|---|
| Protein sequence | MQKPVFHSAV ASSFLSRRQN IGGAATRRPG AVRRYPPGLL RSSLTGFLFL AAWVAFGTTE
EARAQAGPTV SCTTDGAIFN TAYDSSSGGM LTSGTDANWD VALTTTDITG PPPGGLTYAD
AVVVDDPPAN YTTSPFGNAN WISHNSTATQ PTPENYDIFY RYEFSLDPSV DPSTLDLQMT
FFADNSVYEV WVNGVDQNIQ SDYAPEDPYF YSGFQAGNGA SGAMNGAWQT GLNTIVVHIK
SGPGAQAFMA QIESTSVCQP TLTLRKIVDN SQGGSAGPGD FTLQAEGPTT IQGVMGDPAV
TDASVPAGTY ALSESYTELG YAASEYSCAI DGGAATDGNS VALENGQSAV CTITNTFSPS
FGSCSPSMYL AQNVPTQLFR FETSDNPFDV NPIGPASNNQ YNGIAMNPID NYIYGFEINT
TPPRLARVGS DGGVQVLGEI AGFPNATVTG EFSPDGTLYS ATAGRLYTVN VTNRTATSVP
LTGAATHGPD LAWYNGLLYS VTGTGQLVTI DPATGFVDTV GETGLTQNSF GGMFGASNGI
FGSNNVGGFY RFNVETGRGT LISDLQGSGQ NDGAKCATTP LTFPADVTIA KDDGSETYTA
GGEVVYTIVV SNDGPFGVAG TLVNDPLPDG ITDAEWTCGS PTGGGYCSVP SGTGAITDVP
VDLPVDGDVG SSVTFTLTMT VPADFEGDLV NTATVTNPSD VPDPDPNDNE STDTNTVPVI
RKVKELVGES GELAGVAEPG ETLTYEITLT NPYDSARGSY ELIDDYDENL TVVDAAGGTD
DGDLITWTGL TVPAHDGTNP GQLVLTVQLQ VVDPIPESVT RISNIVYEPN EIVDCRVTPT
QCYELPASAR ILRMKQLVAE DGLTEGVAEP GERLTYEITL TNTGGPADDY AIQDLLDENT
VFVSADNGGT HSGGNPGGGV VDWTGLSIPE HDGTNPGQLV LTVIATVVDP LPDGAIGISN
MIKEPGDPDP VCPSDDCVTV PSQLTGLELV KTGTYEDTDG NGFANVGDTI HYKFTVTNTG
NVVLQDVVPE DAGPTFDGQE GGGELSAFDP ASATLEPGEE TVFEASYVLT QADIDNGAGV
EEGVENTATA VGYANGDRVT GTEVNSPGSG TSLDLPAAAS NISIAKIANL RAIRRGEQAP
FTIRVTNLAG SRVDGLTVVD RIPPGFRYVE GSATVGDVAV EPVEAGREIR FENLSLEGNQ
EIEIRLRMLA LSSAGPGEHV NRARAEDASG RQLAPEAQAV VEILAEPVFD CGDVIGKVFD
DVNRNGYQDQ GEPGLPGVRV ATVKGWLITT DEYGRFHVAC ADLPEARIGS NFIMKLDTRT
LPTGYRLTTE NPRVVRLTAG KTTKLNFGAA VGRVVRLELT DAAFAPDAAQ LKPEWAESVD
RLIGVLAEEQ SVLRLTYFYG GVDRALAGAR IMQARELIAE RWRRRGGAYR LEIEMRVEAV
Q
|
|---|
| |