Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_4341 |
Symbol | |
ID | 4178825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008242 |
Strand | - |
Start bp | 244108 |
End bp | 244779 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638059236 |
Product | VirB8 |
Protein accession | YP_665958 |
Protein GI | 110347140 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3736] Type IV secretory pathway, component VirB8 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0342732 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGACGA CAGACAGTCT CAAGGAATAT TTCGACAAGG CGCGCCGCTT CGATCAGGAC CGGATGGTCT CCGCCGAGCG CTCAAAACGA CTCGCCTGGT TCGTCGCCAT CGTCGCCAGC GTGCTGGCCT GCGTCTCGGT TGCCGCCGTG GTCGCGCTGA CGCCGCTCAA GACGGTCGAA CCCTTTGTCA TCCGCGTCGA CAATTCGACC GGCATCGTCG ACGTCGTGTC AGCCATGGCG TCGACCGCCG GCAACTATGA CGAGGAGGTC ACCAAATATT TCGCCGCCCG TTACGTCCGG GCACGCGAAG GCTATGTCTG GTCGGAAGCG GAAGAGAATT TCCGGACCGC ATCGCTGATG TCGAACGCGG CTGAGCAGCA GCGCTTTGCG GCCGCGTATC GCGGCGGCAA TCCGGAATCT CCGCAGAATG TCTATGGGCG CTCGGCGACG TCCCGTATCG GGATCAAGTC AATCTCACTC ATCAACAGCA ATGTCGTTTC AGTCCGCTAC ACGCGGACAA TCACACGCGG CGAAGATGTC CGCACAACCC ATTGGGTGGC AACGATCACC TATTCCTATG CCAATGCCCC AATATCCTCC AGCGACCGGT TGGTGAACCC GCTTGGGTTC GTGGTGAGCG AGTACCGGGC CGATCCGGAG GCCTTGAATT GA
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Protein sequence | MVTTDSLKEY FDKARRFDQD RMVSAERSKR LAWFVAIVAS VLACVSVAAV VALTPLKTVE PFVIRVDNST GIVDVVSAMA STAGNYDEEV TKYFAARYVR AREGYVWSEA EENFRTASLM SNAAEQQRFA AAYRGGNPES PQNVYGRSAT SRIGIKSISL INSNVVSVRY TRTITRGEDV RTTHWVATIT YSYANAPISS SDRLVNPLGF VVSEYRADPE ALN
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