Gene Meso_4197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_4197 
Symbol 
ID4178547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008242 
Strand
Start bp95562 
End bp96251 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content66% 
IMG OID638059104 
Productcondensin subunit ScpB 
Protein accessionYP_665827 
Protein GI110347009 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.323674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGAGG CGCGCGCGAG GCGGGGGAAG GGACGAGCAG ACGACGGTCT GTTTGATCGG 
GAGCTCGACC ATCTGCCGCC GGAGGCACGC TGGCGGGAAT GGATGAACCG CGTCGAGGCG
ACGATTTTTG CCGCCAGCGA GCCGGTCGGC CGCGAGACGC TGGCGCGGAT CGTGGGAAAG
AGCTGCAGCA TCGATCTTCT CATCGACGAC ATCCGCGAGG AACTGCGCGG CCGCCCCTAC
GATCTGGTTG CGGTCGCCGG CGGCTGGAAG CACCTGACCC GGCCCGCCTA TGCCGACGTC
ATCCGCACCG CGGTTGGGAG AAGTGAACGC GCGGTCGATC TGACGCTGTC GGAGGTGCTG
GTGCTGATGT GCATCGCCTA CTTCCAGCCG ATCACCCGTG GAGAACTGTC GTCCTTCTTC
GGCAAGGAGA TCAGCCGTGA CCTGATCGGC AATCTGCGAT CGCACGGCTT CATTGCATCC
GGCCCGCGCG CGCCGCAGCC CGGGGCGCCC TACACCTATG TCACCACGAA AGAGTTCCTG
CTCGAGTTCG GGCTCGACAC GCTGCACGAT CTTCCCGACC GCGAGGCGCT CGAGGACGCG
GGACTGCTGT CCAAGGAAAA GCTGCTGGCC GGCGACATCA TGCCCGACTT TGCCGATGGC
CGGGAGGAAG CCGTCGAGAT CGAGGACTAG
 
Protein sequence
MAEARARRGK GRADDGLFDR ELDHLPPEAR WREWMNRVEA TIFAASEPVG RETLARIVGK 
SCSIDLLIDD IREELRGRPY DLVAVAGGWK HLTRPAYADV IRTAVGRSER AVDLTLSEVL
VLMCIAYFQP ITRGELSSFF GKEISRDLIG NLRSHGFIAS GPRAPQPGAP YTYVTTKEFL
LEFGLDTLHD LPDREALEDA GLLSKEKLLA GDIMPDFADG REEAVEIED