| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4126 |
|---|
| Symbol | |
|---|
| ID | 4178536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008242 |
|---|
| Strand | + |
|---|
| Start bp | 21580 |
|---|
| End bp | 22542 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 638059035 |
|---|
| Product | HflC protein |
|---|
| Protein accession | YP_665758 |
|---|
| Protein GI | 110346940 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | [TIGR01932] HflC protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCAG TTCGAATTGC CGCTCTTGGC GTCTTGGGCC TTGGCTTCCT GGGAGCAACA
CTGACCCTCT ATCAGGTCGA CACCACCGAA TACGCGATCG TGACGCAGTT TGGGCGGCCC
GTCCGCGTGC TCAGTGACCC TGGTCTCTAT ATCAAAGCGC CCGACCCCAT TCAAAGCGTT
CTAAAAATCA GCAAGCAAAT TCAAGTCTAC AACCTACCGA AAACGGAATT CCTGAGTAGC
GACAAGAAGA ACATTATGGT GGAGGCCTAT GCCACCTGGC AAGTAACGGA CGCGCTGGCG
TTTCTGAAGA ACGTCAACAG CCTGCGCGGC GCCAGCACAC AGCTCAACGA TATTATCAAA
GCTGAGCTCG GAGCGGCATT GGGACAGGTC GAGCTCGGAA ATCTCGTCAC AGTAGAAACC
TCACAGGCGA GCCTTCCAGA CACCTTGAAC GCCGTGAAGG AGAGGGCTGC AGCCCGCACG
GGTGCTTATG GCTTCACGGT CACAGATATC CAGCTCAAGG AGCTCACGTT CCCGGAGGCC
AACCTCACAA GCGTCTTCCA GCGTATGCGC TCGGAGCGTG AGGCGATCGC GCGCCAGTTT
CGCTCGGAAG GCGCGGAAGA AGCAGCCCGC ATACGAGCGG AAGCTGATAC AGAGAAGGCG
AAGATTCTCG CCACCGCGAG CCGCGAATCC GCCGAGATCC GAGGGACGGC CGATGCGGAG
GCGATTGCGA TCTATGCGGG CTCCTTCGGC AGGGACAAGG ATTTTTACCG CTTCTCCAGA
ACGCTCGAAG CCTACGACAA GTTCATTGAT GAAGGCACGA CGTTGATTTT GCCAGCCGAT
TCCGAACTGC TTCAGTATCT GGATCCACGA AACGCTCTGA AACTTCCTCC ATCATCGACC
GCGACTGGCG GATCTGCGGT CGGATCGCGC AACGTGACCG CGGATTCGGA GCGCGATAGA
TGA
|
|---|
| Protein sequence | MKPVRIAALG VLGLGFLGAT LTLYQVDTTE YAIVTQFGRP VRVLSDPGLY IKAPDPIQSV
LKISKQIQVY NLPKTEFLSS DKKNIMVEAY ATWQVTDALA FLKNVNSLRG ASTQLNDIIK
AELGAALGQV ELGNLVTVET SQASLPDTLN AVKERAAART GAYGFTVTDI QLKELTFPEA
NLTSVFQRMR SEREAIARQF RSEGAEEAAR IRAEADTEKA KILATASRES AEIRGTADAE
AIAIYAGSFG RDKDFYRFSR TLEAYDKFID EGTTLILPAD SELLQYLDPR NALKLPPSST
ATGGSAVGSR NVTADSERDR
|
|---|
| |