| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4258 |
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| Symbol | |
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| ID | 4176048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 5125422 |
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| End bp | 5126654 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638057295 |
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| Product | Bcr/CflA subfamily drug resistance transporter |
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| Protein accession | YP_663811 |
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| Protein GI | 109900556 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAACG CCCGCTTTAC TACTGATGCT AAGGTTAAAC CTGCCCTAGG GTTAGTTGAG
TTTGTGGCTC TGATGGCGTT GATGACTTCT TTGGTGGCTT TAAGCATTGA TGCCATGTTG
CCGGCGTTGA ATCAAATCGC TTTAGATTTG GTGATTACTG ACCCACAAGA TACGCACCTA
ATCGTTTCGC TATTTTTCAT TGGCATGGCA TTTGGCCAAT TATATTTCGG CCCCGTGTCG
GACGCAAAGG GACGCCGCTT TACCATCATT ACCGGGCTGA TTATTTTTGG TTTGGGTACG
GTTGTGTGTA TGTTCGCTGA GTCTTTGACC GTGCTCTTAG TGGGCCGAGT AATACAAGCT
TTTGGTGTGT CTGGACCGCG GATCGCGGCT TTAGCCGTTA TACGAGATCA GTATAAAGGC
GAAGCGATGG CCCGGGTGAT GTCTTTTATC ATGATGGTGT TTATTTTGGT GCCCATGCTC
GCGCCCAGCT TTGGCCAAGC TATTTTATTT TGGTTTTCTT GGCAGCATAT ATTCTCATCT
TTTTTAGTGA TCGGTCTTCT TACTGGTATT TGGTATTTTA GTCGCCAGCC CGAAACATTG
CCTAAAGATA AACGCGTTCC CTTTAGCTGG AAGCAACTCT CAATTTCTAG CCGCTATATC
TTGAGCAATA AAATGGTGAT GTTTTATACC TTGGCAATGG GGTTCGTGTT TGGGAGTTTT
CTGGCGTACA TCAGTGCCTC TCAAACCGTT TTTCAGGTGA TTTATGATAC AGGCGAGCTT
TTTCCTCTGT ATTTTGCTTT GCTTGCTTTC TCTATCGGCT TTGCTTCATT TATTAACGGT
ACGTTAGTCA TGCGCTTAGG CATGCGTAAA TTGTGTACCT GGGCTGTCTT TGGTTGGTTA
GGTTTTACCA CTTTGCTACT TGCAATGTGC CTAATATATC AAGGCCTTCC GCCACTATAT
GGCTTAGTCA GCATCTTATT TGCCGCGTTC TTTTGCATTG GTATTTTATT TGGAAACCTC
AACTCTATGG CAATGCAACC TCTGGGGGAT ACCGCGGGTC TTGGGGCAGC GATAATAGGG
TCGTTAAGTA GCATGGTATC AGTTCCTGTC GCGGTATTTG TGGGTAGCTT TATAGATAGG
ACAATGACCC CTATCGCCGT CGGGTTCGTA GCCTTCGGGG TTATCACCTC TTTGTTTTTC
TGGTTTGCTG AACGCCCCCA AAGCAACACT TAG
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| Protein sequence | MANARFTTDA KVKPALGLVE FVALMALMTS LVALSIDAML PALNQIALDL VITDPQDTHL
IVSLFFIGMA FGQLYFGPVS DAKGRRFTII TGLIIFGLGT VVCMFAESLT VLLVGRVIQA
FGVSGPRIAA LAVIRDQYKG EAMARVMSFI MMVFILVPML APSFGQAILF WFSWQHIFSS
FLVIGLLTGI WYFSRQPETL PKDKRVPFSW KQLSISSRYI LSNKMVMFYT LAMGFVFGSF
LAYISASQTV FQVIYDTGEL FPLYFALLAF SIGFASFING TLVMRLGMRK LCTWAVFGWL
GFTTLLLAMC LIYQGLPPLY GLVSILFAAF FCIGILFGNL NSMAMQPLGD TAGLGAAIIG
SLSSMVSVPV AVFVGSFIDR TMTPIAVGFV AFGVITSLFF WFAERPQSNT
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