| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4254 |
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| Symbol | |
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| ID | 4176044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 5121048 |
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| End bp | 5121902 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638057291 |
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| Product | DNA-binding transcriptional regulator IlvY |
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| Protein accession | YP_663807 |
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| Protein GI | 109900552 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATTC GAAGCTTGGA ATTATTCCAA CATTTAGCCA GTAGCTTGCA CTTCAGCAAA
ACTGCTGAAG CGTTGTTTGT CAGTCCCTCT ACCCTTAGTC GTGTCATTCA ACGCCTTGAA
GATGACTGTG GCACGCCACT GTTTGTGCGG GACAATCGAA AAGTAAAGCT CACCGCAGCT
GGAGCAAAAC TATTGCGCTT TTCACAGCAA ACCTTGTCTG AATGGAAGAA AGTCAAATGG
GAGCTGCAAC AAGATCACGA GCAAATTCAA GGCGAATTAA GTTTGTTTTG TTCAGTGACG
GCCAGTCAAA GCCATTTGCC AAAATTACTT GATAGCTTTC GTCATCAATA TCCCCAAGTA
GAGATAAAGT TAAACACCGG CGACCCTGCC CTATCTGCTA GTAAGGTGAT GAAACAAGAA
GTGGATGCAG CCATTGCCAT TCATACCCCT GACTTCCCTC CTGACCTGAC GTTCTTACCC
CTTGGCGAGG TGCCTTTACT GCTTATCGCA CCCAAAGAAA CCCAGCTAAC CCGTTTGAGC
CAAGTGGATT GGCGCGAACA TTCTGTCATT CTGCCTGACT CGGGACCATC AAAACGAATT
GTGCACCACT GGTTTGCTGA GCAAGGTATT CGACCGCGAG TGTACGCAAC GGTAGCGGGT
AATGAAGCGA TTGTAAGCAT GGTAGCGCTG GGTTGCGGCT TGGGCATTGT GCCTGAAATA
GTGTTAGACA ATTCCACCAT AAGTCAGCGT GTAAACCGTA TTCGGTTGGA TGACATTGAG
CCTTACCAAA TTGGTTTGTG TTGCATCAGT AAGCGGCAAA GTGAGCCTGC TATTCAGGCG
CTATTCAACT GCTAA
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| Protein sequence | MDIRSLELFQ HLASSLHFSK TAEALFVSPS TLSRVIQRLE DDCGTPLFVR DNRKVKLTAA
GAKLLRFSQQ TLSEWKKVKW ELQQDHEQIQ GELSLFCSVT ASQSHLPKLL DSFRHQYPQV
EIKLNTGDPA LSASKVMKQE VDAAIAIHTP DFPPDLTFLP LGEVPLLLIA PKETQLTRLS
QVDWREHSVI LPDSGPSKRI VHHWFAEQGI RPRVYATVAG NEAIVSMVAL GCGLGIVPEI
VLDNSTISQR VNRIRLDDIE PYQIGLCCIS KRQSEPAIQA LFNC
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