Gene Patl_4251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_4251 
Symbol 
ID4176041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp5117465 
End bp5118085 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content47% 
IMG OID638057288 
Producthypothetical protein 
Protein accessionYP_663804 
Protein GI109900549 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACCT GGTTACATTG GATTGATTTA ATGGGCGTGG CTGTTTTTGC CGTCTCTGGC 
ACATTAATGG CGTATAAAAA GCATATGGAT GGCTTTGGCG TCGTCGTTTT AGCCTCAGTG 
ACGGCAATTG GTGGCGGCAC TCTGCGTGAT ATTATTTTAG ATCTGCCTGT GTTTTGGGTG 
CAAGATCATA GCTTCTTCTT TGCTATTCTA GGCGCAGCGC TTTGTACCAT AATATGGCTA 
CGTATTAGCC ATCGCTTCCC CCTGCGATAT TTGCAAGTTG CCGACGCCAT AGGGTTAGCC 
TTTTTCAACG TCATGGGCTT ACAAAAAGCC CTTAGCTACG GCGCATCCCC TTTTATCGCG 
ATAGCCCTTG GTACCATGAC CGCTGTGTTT GGTGGCTTAA TTCGTGATGT GATTTGTCGC 
GAAATTCCAT TAGTCTTGAA AGGCGATTTG TATGCAACGG CATGTATCAT TGGCGGCGCC 
ACGTACATTG CGGGATCTTA TCTCGGCTTA TCCACTTATA GCTTCATGAT CATGGGCTTT 
GCGGTAACAC TGACCACCCG TTTAGCCGCC ATGAAATGGC ACTGGCATTT ACCTGTATTC 
AACCCGGAAC ACATGGAATG A
 
Protein sequence
MSTWLHWIDL MGVAVFAVSG TLMAYKKHMD GFGVVVLASV TAIGGGTLRD IILDLPVFWV 
QDHSFFFAIL GAALCTIIWL RISHRFPLRY LQVADAIGLA FFNVMGLQKA LSYGASPFIA 
IALGTMTAVF GGLIRDVICR EIPLVLKGDL YATACIIGGA TYIAGSYLGL STYSFMIMGF 
AVTLTTRLAA MKWHWHLPVF NPEHME