Gene Patl_4240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_4240 
Symbol 
ID4176030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp5103795 
End bp5104355 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content42% 
IMG OID638057277 
Producthypothetical protein 
Protein accessionYP_663793 
Protein GI109900538 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAACA CGAGTAACAA ACGTTTGATT ATCACACTCG CTGTGGTGTT TATTTTGCCT 
GTGGTGTTAG CCAAATTGGC TTTAGATAAT AACTGGTTCA ATAAAGCAGC GACTAACAAA 
GGGGAGTTAC TATCACCCAT ATTAGACATG AGCGCTATTC AAGACAAAGC TGCTGAGCCC 
AAGTGGCAGC TGGTATACGT CTTACCTTCA CAGTGCAGTA TTGAGTGTGA GAATGCCTTG 
TACAGCGTTG AGCAAGTATG GACAGCGCTT GGAAAAGAGC ATGACAGAGT GCGTGCAACT 
GTCATTAGTA CACCTGATAG TGACGTCAGT GTCGCTAGGC GGTTGAATGA GCATAGTGCT 
GTTAAGTTGT TAAAAACTAA CGCGGAAAGT GTTAATAATG TGTTTAAAGG TGAGCCGGTA 
GATGCTATTT TCATTGCTGA TACCTTGAAT AACGTGATTT TGCGTTATCC ACTTCAAGTT 
GAGCAACAGC AAGCCATTTT GCATAGTCGT GACATTTTAT CTGACCTACG CAAGCTGCTG 
AAATTATCAC GTATTGGTTA G
 
Protein sequence
MNNTSNKRLI ITLAVVFILP VVLAKLALDN NWFNKAATNK GELLSPILDM SAIQDKAAEP 
KWQLVYVLPS QCSIECENAL YSVEQVWTAL GKEHDRVRAT VISTPDSDVS VARRLNEHSA 
VKLLKTNAES VNNVFKGEPV DAIFIADTLN NVILRYPLQV EQQQAILHSR DILSDLRKLL 
KLSRIG