| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4217 |
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| Symbol | |
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| ID | 4176006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 5077314 |
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| End bp | 5078102 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638057253 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_663770 |
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| Protein GI | 109900515 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATGGT TTGACGTTGG CGTAAACGTA CCTAGCGATG TCACTACCTT GCCCTCTATG
CTTGAGCGCG CAGCTAACGC CAACGTCGCA AAAATAATGC TTACGGGCAC CGATATAAGC
ATCAGCCAAC AAGCCTCAGC GCTTGCTAAA GCGCATCCTG GGCAAGTATT TAGCACTGCG
GGTATTCACC CTCATTATGC ACAGCACGCC GCTATTGATT ACCGACAGCA GATCAAAGCC
CTTGCTGAGC AACCTCAAGT GTTAGCGATT GGAGAATGCG GCCTTGATTT CAATCGTGAT
TTCTCACCAC GAGATATCCA ACTCGCGGTA TTTGAAGCGC AGCTTGTTAT CGCTTGCGAA
ACCGGCCTTC CGGTTTTTTT ACACGAGCGT GATGCGTTTG ACGCCCAGTA TAAATTACTA
CACCAATACC GTAAGCAATT AAGCGGCGCG CTAGTGCATT GTTTTACGGG TAATACTGAG
CAAATGCAGG CGTACCTTGA GCTAGGTTGC TATATTGGTA TCACGGGTTG GGTGACCGAT
GAAAAACGTG GCGGTGATTT AAGAGAAGCC GTCAAGCATC TGCCAATAGA GCGCCTCATA
TTGGAAACTG ACGCTCCCTA TCTGAAACCT AAAAAACTGG GTAGCGACAA GATCACTGGT
GTTAAACAGA ATGAACCTTG CTATTTACCC GCTATTGCCA AAGCGCTAAC GGCGTTAATG
AATACACCGT TAACTGCACT GGCTGACGCT AGTTTGCGCA ACAGCCACGA CTTACTGGCT
ATAGGTTAA
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| Protein sequence | MQWFDVGVNV PSDVTTLPSM LERAANANVA KIMLTGTDIS ISQQASALAK AHPGQVFSTA
GIHPHYAQHA AIDYRQQIKA LAEQPQVLAI GECGLDFNRD FSPRDIQLAV FEAQLVIACE
TGLPVFLHER DAFDAQYKLL HQYRKQLSGA LVHCFTGNTE QMQAYLELGC YIGITGWVTD
EKRGGDLREA VKHLPIERLI LETDAPYLKP KKLGSDKITG VKQNEPCYLP AIAKALTALM
NTPLTALADA SLRNSHDLLA IG
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