| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4201 |
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| Symbol | |
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| ID | 4175990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 5059420 |
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| End bp | 5061594 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638057237 |
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| Product | glutamine synthetase, catalytic region |
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| Protein accession | YP_663754 |
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| Protein GI | 109900499 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3968] Uncharacterized protein related to glutamine synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.856805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGGTC ATGCTTCACG CCTTAACGCT ATTACGCAAA TCACTAACAG AGCACCAAAA
GAGTGCACCG GTACTAAGCC GCTAACAGAT ATTTGGGCGA CAGATGTATT TGGTCTAGCA
AAAATGGAAG AAGCCCTGTC GAAAAATGCA TTTAAAGCGA TTAAAAATAC CGTCACGACT
GGCGCGCCGC TCGATCCAGC TACCGCGGAT GTAGTTGCCT CAGCGATGAA AGTATGGGCT
ATCAGCAAAG GGGCAAAGTT CTTTTCGCAT GTCTTCTACC CTATGACCAA CATCACGGCC
GAAAAGCATG ATGGCTTCAT CATTACTAAT CCAGAAGGTG CTGCCATAAC TGAGTTTACG
GGCAGCCTGT TGATTAAGGG GGAGCCTGAC GGTTCATCTT TCCCTAATGG TAGTTTACGT
ATGACCAACG CGGCACGTGG CTATACCGCG TGGGATCCCA CCAGCCCCGC TTACATTATG
CATACTGCTA ATGGCGCGAC GTTGATGATC CCTAGCGTAT TTATTTCGTG GACTGGGGAA
GCACTGGATA AAAAGATCCC ATTGTTGCGC TCAAATGCCG CCATGGATAA AGCAGCCCGC
AAAGTACTTA GCCTTATGGG CGAAGAAACA ATTGCGCCGT TGAACGCTAG CTGTGGTGCA
GAGCAAGAAT ACTTTCTTGT GGATGAGCAT TTTGCCAACT TGCGTCCAGA TTTGTTACTT
GCAGGTCGCA GTTTATTTGG TGCAGCTCCT GCGAAAGGCC AGCAGTTCGA TGATCATTAC
TTTGGTGCTA TTCCAGCCCG TGTTCAGGTG TTTATGCAAG CCTTTGAGGA CAAGCTTTAC
CGTTTAGGTA TACCGGCTAA AACTCACCAT AACGAAGTGG CGCCCGGGCA ATTTGAAATA
GCGCCTTACT TTGAATCCTC GAACGTGGCC GCTGATCACC AACAATTAAT GATGACATTG
ATGAAAAGCA CGGCTAAAGA GCACGGTTTC TTGTGCCTGT TACATGAAAA GCCTTTCGCT
GGCGTCAATG GCTCTGGTAA GCACGTAAAC TGGTCAGTAG GCAACGCCAC CCAAGGCAAC
TTGCTAGACC CAGGTAGCAC ACCACACGAT AACCTAAACT TCTTGCTGTT CTGTGGCGCG
GTTATTCGCG GTGTGCACAA ACACGGCGGT TTATTGCGTG CGGTTATTGC TTCGGCATCA
AATGACCATC GCTTAGGTGC AAACGAAGCA CCACCAGCCA TACTTTCTGT GTATTTAGGC
GACCAATTAG AAAGCGTATT CAACGACATC AAAGCCGGTA AATTACTTGA AAAAGCCAAA
GGCGGTTTGA TGGACCTAGG CTTGTCGCAA ATATTAAAGT TTGAACGTGA CCCCGGGGAC
CGTAACCGTA CCTCTCCTTT CGCCTTTACC GGAAACCGCT TTGAATTCCG CGCGGTAGGC
TCGTCTCAGT CAGTTTCTGG GCCACTGGTC GCTATGAATA CCATGCTAGC CGATTCATTA
GATTGGATAG CTGAAAGGCT TGAGGCTGCA CTTGCCAACG GAACAGATAA AACTGCGGCG
GTTATTGTGG TGCTAAAAGA ACTAATGGAA ATGCACGGTA ATGTGGTTTT CGGTGGTGAC
GGCTACAGTG AAGAATGGCA TAAAGAAGCG GTAGAAGTTC GCTGCCTCAA AAACCTACCC
ACCAGTGCCG ATGCCCTACC TGAATTTAAA GCGCCAGAAG TGATCGATTT ATTTGTTAAC
ACAGGCGTGT TGTCACAGGA CGAGTTATTT AGCCGCTTTG AAGTGTACGC TGAGCAATAT
ATTTTATCTC TTGAGGTAGA AGCAAAACTC GTTATTGATA TGGCCACCAC GCAAATATAC
CCTGCAGTGA CTCAGCACCT AACCCACTTA GCGGATGTCA GCCAAACCTT ATCAGGCCTA
AGTTTAAGTC TAGAAAACAC CGACTTAAAC GAAGCGGTAG AACAGGCCAA TGGCATGATG
AGCGCGGTAA AAGAGCTGAA AGTAGCACTA GCAGAGCATA ATTTTGCGAG CACGGAAGAA
CACATGTCGT TTAGCGCGAA AACCTTGTGC CCATTATTGC TAAAAGTACG TGAACACGCA
GATACACTTG AAGGCATGGT AGCTGATGAC TTATGGCCGC TGCCTAAGTA TCAAGAGATG
TTATTTATTA AGTAA
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| Protein sequence | MSGHASRLNA ITQITNRAPK ECTGTKPLTD IWATDVFGLA KMEEALSKNA FKAIKNTVTT
GAPLDPATAD VVASAMKVWA ISKGAKFFSH VFYPMTNITA EKHDGFIITN PEGAAITEFT
GSLLIKGEPD GSSFPNGSLR MTNAARGYTA WDPTSPAYIM HTANGATLMI PSVFISWTGE
ALDKKIPLLR SNAAMDKAAR KVLSLMGEET IAPLNASCGA EQEYFLVDEH FANLRPDLLL
AGRSLFGAAP AKGQQFDDHY FGAIPARVQV FMQAFEDKLY RLGIPAKTHH NEVAPGQFEI
APYFESSNVA ADHQQLMMTL MKSTAKEHGF LCLLHEKPFA GVNGSGKHVN WSVGNATQGN
LLDPGSTPHD NLNFLLFCGA VIRGVHKHGG LLRAVIASAS NDHRLGANEA PPAILSVYLG
DQLESVFNDI KAGKLLEKAK GGLMDLGLSQ ILKFERDPGD RNRTSPFAFT GNRFEFRAVG
SSQSVSGPLV AMNTMLADSL DWIAERLEAA LANGTDKTAA VIVVLKELME MHGNVVFGGD
GYSEEWHKEA VEVRCLKNLP TSADALPEFK APEVIDLFVN TGVLSQDELF SRFEVYAEQY
ILSLEVEAKL VIDMATTQIY PAVTQHLTHL ADVSQTLSGL SLSLENTDLN EAVEQANGMM
SAVKELKVAL AEHNFASTEE HMSFSAKTLC PLLLKVREHA DTLEGMVADD LWPLPKYQEM
LFIK
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