| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4151 |
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| Symbol | |
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| ID | 4175940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4989351 |
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| End bp | 4991774 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638057187 |
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| Product | hypothetical protein |
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| Protein accession | YP_663704 |
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| Protein GI | 109900449 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.735313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCCT TTTTAGCCAA TTTTATTATT CGCCACGCCA AGCTTATTCT TGTTGTTTTT
GTATTGGCCG GCACTTTAGC CGCTTGGTCT GCGCAGCAAT TTAAAATTGA TGCATCTGCC
GATACTCTGC TGATAAAAAA CAATAAGATG TTCGTTGAGA CTCAGGTGGT AAACGAAAGA
TTCTCTCCTC AAGAATTTAT TTTGGTCGCA TACAAACCAA AGAATCACGC CTTGTTTAGC
CAACAAACGT TTAATGATAT CCAACAAATA TCCAGTGAGT TTAAAGACTT ACCCAGAGTC
GGCGGCGTAA CTAATATTCT GAATGTTCCT CTTCTTTCAC TGTCGAATGA ACTGGACCCA
AACTTAAAGC CAGAACAGCT TACATGGCAA GCCAATCGTT ATTCGCCAGA TAGAATGCGA
CAGGTCTTTA CTGATCACCC ATTATTTACG GACCTTTTGG TGAATCAAGA CCAAACTGCC
ACCGCCATGC AGATCGTGTT TAAGCCCAAC GAAGAGCTAC TGGATATACA GAGTCAAATT
ATTGCGATCC AAAAGGGCAT TCTACAGGGC GAGAACACCG AGCTAAGCGA AGAAGACGAG
CAGAAAATTG AAGCCTTGAA AGCGAAGGCG CAACCCATTG AAGAACAACT CAAACTCACT
CGTCAGCAAG AGATAAAGCA GATCTATCAG ATCATAGAAC CGTTTAAAGA CGACGCCGAT
CTATTCTTAG GTGGAGCCTA TGTACTCGGC CAGCAAATGA TTGACATCAT ACAAAGCGAT
TTACTGTTAT TTGGCAGTGC TATCGGCTTG GCGATATGTC TCATACTGTT TGTATTGTTT
AGAAAAATAC GTTGGGTTGT TTTGCCACTT CTCTGCTGCG GTTTGAGTGT ATTGCTGACC
GTCGGGTTAT TCGGTGTGTT AGATTTTAGA GCCACAGTCA TTTCATCAAA CTTTATTGCA
CTGCAGCTCA TACTCACGCT GGCCGTAGTC GTGCATCTCA TCGTCGAGTT TAGACAATTA
GAAGCAGCAG ATACTGAATC GAATCAGCAA GACCTGCTAC GTCAAACGTT TATCAATAAA
TTCAAACCCT GCCTATATGC AGGTATTACC ACCAGCGTAG GTTTTGCTTC TTTACTCTTT
AGTGGCATTC AGCCCGTAGT GAGTTTTGGC TGGATGATGA TAGTAGCAAT GGGTGTGTCT
ATCAGCTCAA GTTTAATCCT GTTTCCTGCG GTACTGGCAT CATTTACGCG CAAGGGTGAC
AGCCACGAAG GCCGCCTGAG TCAGTGGTTG GTATCAGGAC TCAGCGCCTT TAGTTTGAAG
CGCCCCACTT TCATTGTATT AACCACCCTC GTTATAGGCG GCGGAGCAAT TTTTGGGGTG
CTAAAATTAG ATGTCGAGAA CAGCTTCCTA AATTATTTTA AAGAATCCAC GCAAGTACGC
ACGGAGTTGG AGTTTATTGA CAAAGAATTC GGTGGGTCAA CGCCTTTGGA TTTGATTTAC
ACCATCCCTG AAGACGAGCG TCGCGATGAT TTGGTCATGA GTGCTAAGAC AGTGCAGACC
CTACAAAAAA TTCAGCATGT GATGCGCCAG TATGAAGCCA CTGGCAATAT TACCTCAGTG
GTTAACTTCA CCGAGTTAGC AAAAAAGGTT AATCAGGGCA AGCCACTGAC CGAGTACGAG
TTAACCGTCA TTTACACATT ACTGGATGAT TCTCTCACCG AGCAGCTGCT TGGCGCCTAC
TTTAACCCTG AAAATCAACA ATTGCGTATT AGCACACGTA TTCAAGACAG CACAGAGAAC
TTTAACCGTG CAGAGTTTTT GCAGACCCTT CGTGACGACT TAGACATGTT AGAAATAGCG
CCTGACAGCT ACAGCCTGAC GAATTTATTT GTACTGTATC AAGACATTTT ACAACGGTTG
TTTACTTCCC AGATTATGAC CCTAGGCTTA GTCTTTGGTG CATTAACACT AGTGCTACTA
GTAATATTTC GCTCATTTAA AGTCGCCATT ATCGCGGTTA TTCCAAACAT ACTGACGACT
TTGGTTATCT TGGGAGTGAT GGGATGGCTA GCCATCCCCC TGGACTTAAT GACCATCACC
ATCTCAGCCA TTGCTATGGG GATCGCGGTA GATGACACAA TCCATTTTGT GCACCGCTAC
TTAGAAGAGT TGAATAAAGA GTCTAATGAC AGCCAGCAGG CCGTTAAAAA TACATTTAAG
TCTGTCGGTT TTGCATTGAT TTATACGACG ACGATTATCG CTGTAGGTTT TTCGTTGCTC
AGTTTCTCCG ACTTTGTGCC AAGCATTCTC TTTGGATTAT TAACCTGCTT AGCCATGCTA
TTGGCGTTTA TAACCGATAC CACCTTACTG CCCGTGCTAC TTAAAAAATT CGTTAAGCCT
AAACCAGCTT TGGCAGGCTC TTAA
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| Protein sequence | MSAFLANFII RHAKLILVVF VLAGTLAAWS AQQFKIDASA DTLLIKNNKM FVETQVVNER
FSPQEFILVA YKPKNHALFS QQTFNDIQQI SSEFKDLPRV GGVTNILNVP LLSLSNELDP
NLKPEQLTWQ ANRYSPDRMR QVFTDHPLFT DLLVNQDQTA TAMQIVFKPN EELLDIQSQI
IAIQKGILQG ENTELSEEDE QKIEALKAKA QPIEEQLKLT RQQEIKQIYQ IIEPFKDDAD
LFLGGAYVLG QQMIDIIQSD LLLFGSAIGL AICLILFVLF RKIRWVVLPL LCCGLSVLLT
VGLFGVLDFR ATVISSNFIA LQLILTLAVV VHLIVEFRQL EAADTESNQQ DLLRQTFINK
FKPCLYAGIT TSVGFASLLF SGIQPVVSFG WMMIVAMGVS ISSSLILFPA VLASFTRKGD
SHEGRLSQWL VSGLSAFSLK RPTFIVLTTL VIGGGAIFGV LKLDVENSFL NYFKESTQVR
TELEFIDKEF GGSTPLDLIY TIPEDERRDD LVMSAKTVQT LQKIQHVMRQ YEATGNITSV
VNFTELAKKV NQGKPLTEYE LTVIYTLLDD SLTEQLLGAY FNPENQQLRI STRIQDSTEN
FNRAEFLQTL RDDLDMLEIA PDSYSLTNLF VLYQDILQRL FTSQIMTLGL VFGALTLVLL
VIFRSFKVAI IAVIPNILTT LVILGVMGWL AIPLDLMTIT ISAIAMGIAV DDTIHFVHRY
LEELNKESND SQQAVKNTFK SVGFALIYTT TIIAVGFSLL SFSDFVPSIL FGLLTCLAML
LAFITDTTLL PVLLKKFVKP KPALAGS
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