| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4091 |
|---|
| Symbol | |
|---|
| ID | 4175880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | + |
|---|
| Start bp | 4915875 |
|---|
| End bp | 4916318 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638057127 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_663644 |
|---|
| Protein GI | 109900389 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02284] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAATC CAAATCATGT TGAAAAAGTT TCCTCTATTA TCAAAGTACT AAACGGCGGT
ATCGAGTTCT ATTCAGACGC CACAGAGAAA GTGGAATCTC AGAGTATCAA AACTGTTTTC
CAGCAAATGA TTAATGACAA GCAAGCTGCC ATCACTACCT TGCAGCCCTT CGCCGTAGCT
GAAAATGGCG ATTACGAAGA CGACAGCGCG GTCGCTGTAG ATATTAGAAA TATGTACACC
AAAGTCATCA GCTCACTCAC TTCTAACAGT GACCACACAT TCGTGAGTCA ACTTGAAGAA
GTGGAAGACA AAATACTTGC TGAGCTGCGC GAGGCGCTTA AAGAAGACCA ACCTGCAGCA
TGCACCATGG CGCTAAATAA AGTATTAACT GACATGAAGC GTAACCATGA TCAGATGCGC
GCTTTACAGA AAAGCACCGC TTAA
|
|---|
| Protein sequence | MSNPNHVEKV SSIIKVLNGG IEFYSDATEK VESQSIKTVF QQMINDKQAA ITTLQPFAVA
ENGDYEDDSA VAVDIRNMYT KVISSLTSNS DHTFVSQLEE VEDKILAELR EALKEDQPAA
CTMALNKVLT DMKRNHDQMR ALQKSTA
|
|---|
| |