Gene Patl_4087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_4087 
Symbol 
ID4175876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp4910906 
End bp4911487 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content47% 
IMG OID638057123 
Productredoxin 
Protein accessionYP_663640 
Protein GI109900385 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAGCT GCTCATCCCA TCTCATTAAC CAATCCTTAA GGAGGACGAC AATGAATTCT 
GAAAAACTCA CCCCAGGCGT CACTTTCCCT GAAATTCAGG TATTAGACAC CAAAGGCAAT 
ATCCAAAGCT TAGTCAGTCC AACAGACGCT GAGCACTGGA CTATGGTTGT GGTTTATCGC 
GGAGTGCACT GCCCAATTTG CAGTAAATAC CTCACCCAAT TGCAAGAAAT GCGCTCTCAA 
TTTCAAGACA TTAAAGTTGA TATTGTGGCC GTGTCCGCTG ATTCAGTTGA GCAACTTAAC 
ACCAAGCTTG ATGACGTATC GGTCGAATTC CCGGTATATG CAGGTTTAAC CAAAGAGCAC 
ATGAGCGCAC TTGGGTTGTA CCTATCACAG CCGACTTCTG AGGCTGAAAC CGACCACGAC 
TTCCCTGAGC CTGGCCTATT TGTTGTTAAC AGCGACAACA AAGTACAAGT GTTAGAGATT 
GCCAACAGCC CATTTGTTCG CCCAGACCTG AATATGTTGG TTTCGGGTTT AGGCTACACG 
CGCAAGAACG ACTACCCAAT CCGAGGGACT AAATCGTTCT AA
 
Protein sequence
MHSCSSHLIN QSLRRTTMNS EKLTPGVTFP EIQVLDTKGN IQSLVSPTDA EHWTMVVVYR 
GVHCPICSKY LTQLQEMRSQ FQDIKVDIVA VSADSVEQLN TKLDDVSVEF PVYAGLTKEH 
MSALGLYLSQ PTSEAETDHD FPEPGLFVVN SDNKVQVLEI ANSPFVRPDL NMLVSGLGYT 
RKNDYPIRGT KSF